Gene Namu_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1163 
Symbol 
ID8446759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1283028 
End bp1283723 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content72% 
IMG OID645040300 
Productresponse regulator receiver and unknown domain protein 
Protein accessionYP_003200559 
Protein GI258651403 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCGTG TGCTCGTCGT CGAGGACGAG CCGATCGCCG CCCGTGCGCA CAAGGCGTAC 
GTGGAGCGAA TCGGCGGGTT CGAGGTGGCC GCGGTGGCCA ACTCCCGGAT CGAGGCCGAA
CGGGCCCTGG CCAAGGGCGG CATCGACCTG GTCCTGCTCG ACCTGCACCT GCCCGACGGC
AACGGGCTGG ACCTGTTCCG CCGGATCCGG GCGGCCGGCT CGACGGTGGA CGTGATGGTG
GTGTCCTCGG CCCGGGACGC GGATGTGGTG CGTTCGGCGG TGGCCCAGGG CGCCGTGCAG
TACCTGCTCA AGCCGTTCGC GTTCAACGCC CTGCGGGACC GGCTGACCTC CTACCGGGAG
TTCGCCGAGC AGGTCGCCGG GGCCGAGGAC GTCGACCAGG CGTCGGTGGT CCGGGCCCTG
GGCATGCTGC GGGCGCCGAA CACCGGATCG CTGCCCAAGG GCATGACCAA GGAGACGCTG
GCCATCGTGG TCGGCGCCCT GCGGGAGCTG GGCGATGCGT CGGCGACGCA GATCGGCGAC
TTCCTGGGGG TCTCCCGGAT CACCGCGCGC CGCTACCTGG AGCACCTGGC CGACACCAAT
GTGGCCGAGC GGACGCTGAA GTACGGGCAG GTCGGGCGGC CGGAGACGCG TTACGGGCTG
CGTCGCGCCG ACCCGCCGAA CCAGCCGATG GGTTAG
 
Protein sequence
MIRVLVVEDE PIAARAHKAY VERIGGFEVA AVANSRIEAE RALAKGGIDL VLLDLHLPDG 
NGLDLFRRIR AAGSTVDVMV VSSARDADVV RSAVAQGAVQ YLLKPFAFNA LRDRLTSYRE
FAEQVAGAED VDQASVVRAL GMLRAPNTGS LPKGMTKETL AIVVGALREL GDASATQIGD
FLGVSRITAR RYLEHLADTN VAERTLKYGQ VGRPETRYGL RRADPPNQPM G