Gene Namu_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1140 
Symbol 
ID8446736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1259813 
End bp1260445 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content72% 
IMG OID645040277 
Productribosomal protein S5 
Protein accessionYP_003200536 
Protein GI258651380 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.5558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGAC AACAGCGCGG CGGCTTCGGC GGCGGCGGCG ACCGGAGCAA CGATCGCGGA 
GACCGGCGGG ATCGCCGGGG CGGTCGCGAC GGTGGCCGTC GCGATGCCCC CGCGGAGAAG
AACCCGTTGC TCGAGCGGAT CGTGGTGACC AACCGGGTCG CCAAGGTCGT CAAGGGTGGT
CGGCGGTTCT CGTTCACCGC TCTGGTCGTC GTCGGTGACG GCGACGGGCA GGTCGGCGTC
GGTTACGGCA AGGCCAAGGA AATCCCGGCC GCCATCGCCA AGGGCGTCGA GGAAGCCAAG
AAGTACATGT TCCGGGTGCC CCGGATCGCC GCCACCATCC CGCACCCCGT GCAGGGTGAG
GCGGCCGCCG GCGTCGTGCT GCTGCGCCCG GCGTCCCCCG GTACCGGTGT CATCGCCGGT
GGACCGGTGC GCGCCGTGCT CGAGTGCGCC GGCATCCACG ACGTGCTGAG CAAGTCGCTC
GGCTCGGACA ATCCGATCAA CATCGTGCAC GCCACGATCG ACGCCCTCAA GCGGCTGCAG
CAGCCCGAGG CCGTGGCCGC CCGTCGTGGG CTGCCGATCG AGGACGTCGC CCCGGCGGCG
ATGCTCCGGG CGCGTGCCGG TCAGGGAGTC TGA
 
Protein sequence
MPGQQRGGFG GGGDRSNDRG DRRDRRGGRD GGRRDAPAEK NPLLERIVVT NRVAKVVKGG 
RRFSFTALVV VGDGDGQVGV GYGKAKEIPA AIAKGVEEAK KYMFRVPRIA ATIPHPVQGE
AAAGVVLLRP ASPGTGVIAG GPVRAVLECA GIHDVLSKSL GSDNPINIVH ATIDALKRLQ
QPEAVAARRG LPIEDVAPAA MLRARAGQGV