Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1087 |
Symbol | |
ID | 8446683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1207424 |
End bp | 1208593 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645040225 |
Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
Protein accession | YP_003200484 |
Protein GI | 258651328 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.607916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCACGA CGGAAGAAAC CGCCCCCAGC CAAGTGACCG ACCGCATCCA GCGGATCACC ATGCCCAAGT GGGGCCTGTC GATGGAGTCC GGCAAGGTCA CCGACTGGTT CGTCGCCGAG GGTGACGAGC TGGCCCACGG CCAGGACATC TGCGAGATCG ACACCGACAA GATCGCCGGC GCCCTGGAAT CGACCTGGGC CGGCACCGTC CGGGCCCTGG TCGTGGACAC GATGGTGGAC GTGCCGGTGG GCGGCACGAT CGCCCTGGTC GCCGACGCCG ACGTGCCGCA GGAGGAGATC GACGCGGCGC TGGCCCAGGC CCGCGAGCAG CTGGCTTCCG GTGACATCGT CGACGATTCC GGCCCGAAGC TGGGCACCGT CCAGCTCGAC GGGACCACCA TCGCCTACGC GGTGCTGGCC CCGGAGGAGC CGACGGCGGA GACGGCCGTG GTCTTCGTGC ACGGGTACGG CGGGGACAAG GACTCCTGGA TGTTCGTCCA GGAACCCATC GCCGCCGACG CCGATCGGCC CCGGGCGACG TACGCGCTGG ACCTGCCCGG GCACGGCGCG TCGAGCAAGG ACGTCGGGCC CGGCACGATC GATTCGCTGG CCGCGATCGT CATCGGGTTC CTGGACGCCC TTGAGCTCTC CCGCGTGCAC CTGGTCGGGC ACTCGATGGG CGGGGCGGTG GTGGCGGCGG TCGCCGGCAG CCCGGCGGCC GCCGGGCGGG TGTCCTCGCT GACGCTGATC TCCCCGGCCG GCGTCGGGCC GCAGATCAAC GTGGAGTACC TGCGCGGGTT CGCCGGGGCG CAGACCCGGC GGGAACTCAA GCCGCACCTG CTGGAGCTGT TCGCCGATCC GTCGCTGGTG CACCGCCAGT TGATCGACGA CCTGTTGCGG TACAAGCGGA TCGACGGCGT CGATGTCGCC CTGGCCACGT TGTCCACGCA CCTGGCCGAC GGCGTCGACG TGACCGCGGC GCTGGCCTCG TTCGGCGGCC CGACGGTGGC CGTCTGGGGC GCGCAGGACG CCATCGTCCC GGCGGCGAAT GCCTCGGCCC TGGGCAGCCG GGTCCCGGTG CACGTGGTCG ACGGGGCCGG ACACATGGCC CACATGGAAA AGCCGCACGA GGTGGTCGCG GCCATTCACC AGGCCATCGG CACGAGCTGA
|
Protein sequence | MTTTEETAPS QVTDRIQRIT MPKWGLSMES GKVTDWFVAE GDELAHGQDI CEIDTDKIAG ALESTWAGTV RALVVDTMVD VPVGGTIALV ADADVPQEEI DAALAQAREQ LASGDIVDDS GPKLGTVQLD GTTIAYAVLA PEEPTAETAV VFVHGYGGDK DSWMFVQEPI AADADRPRAT YALDLPGHGA SSKDVGPGTI DSLAAIVIGF LDALELSRVH LVGHSMGGAV VAAVAGSPAA AGRVSSLTLI SPAGVGPQIN VEYLRGFAGA QTRRELKPHL LELFADPSLV HRQLIDDLLR YKRIDGVDVA LATLSTHLAD GVDVTAALAS FGGPTVAVWG AQDAIVPAAN ASALGSRVPV HVVDGAGHMA HMEKPHEVVA AIHQAIGTS
|
| |