Gene Namu_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1040 
Symbol 
ID8446636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1149297 
End bp1149983 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID645040178 
Productresponse regulator receiver and unknown domain protein 
Protein accessionYP_003200437 
Protein GI258651281 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG AGCAGGCCGA GTTCGGGGTG CTGGTCGTCG ACGACGACTT CATGGTGGCC 
CGCATCCACT GCCGGTTCCT GCAGACCCAG AACGGGTTTC GGGTGGACGG GGTGGCCAGC
ACGGGAATCG ACGCGCTAGC CAAGCTGGCC GAGCTGAGCC CGGATCTGAT GCTGTTGGAC
GTGCACCTGC CGGACATGAG TGGTCTGGAG GTGCTCCGGA TCGCCCGGCA GGAGCACCCC
CGGGTGGACG TCATCGTGGT CACCGCGGAG CGCGATCTGG ACGCGGTCCG CGAGGCCTGG
CAGGGCGGCG CGATGTCCTA CCTGGTCAAG CCGTTCGAGT ACACCGCGTT GGCCGAGAAG
CTGGCCCATT TCCGCAAGGC CCGGGCCCTG CTGGACACCG CCGAGGTGGA CCAGGGTGCG
ATCGACCAGC TGTTCGGCGT CGGCGGCTCG ACCACCCGGC CGCGGGCCGA CCTGCCCAAG
GGCCTGAGCC GGGAAACGGC CGATCTGGTC CGCCGCTCGC TGAGCGCCGA CGAGGCCCTG
TCGGCCACCG AATGCGCCGA GCGGGTGGGC ATCTCGCGGG TCAGCGCCCG CCGCTACCTG
GAGTACCTGG AGCAGACCGG GGTGGCCCAG GTGCGGCTCA AGTACGGCAA GACCGGCCGC
CCCGAGCGGC TGTACCGGCT GGTCTGA
 
Protein sequence
MSSEQAEFGV LVVDDDFMVA RIHCRFLQTQ NGFRVDGVAS TGIDALAKLA ELSPDLMLLD 
VHLPDMSGLE VLRIARQEHP RVDVIVVTAE RDLDAVREAW QGGAMSYLVK PFEYTALAEK
LAHFRKARAL LDTAEVDQGA IDQLFGVGGS TTRPRADLPK GLSRETADLV RRSLSADEAL
SATECAERVG ISRVSARRYL EYLEQTGVAQ VRLKYGKTGR PERLYRLV