Gene Namu_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0920 
Symbol 
ID8446512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1016442 
End bp1017962 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content74% 
IMG OID645040056 
ProductUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 
Protein accessionYP_003200319 
Protein GI258651163 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG CACGTAAACC CGTCGGCCGG ATCGCCTTTG TAGGGGCGGG TCCCGGCGAT 
CCGGGCCTGC TGACCATGCG CGCGGCCCAT GCGCTCGACG CGGCCTCACT GGTGGTGACC
GATCCCGACG TGCCCGCCGA CATCACCGCG CTGGCCGGCG AGGCCGAGGT CAAGCCGGCG
GTCGGCGAGC CGGCCGAGGT CGCCAAGGCA CTGGTGGCGG CGGCCAAGAA CGGCCAGTTC
GTGGTCCGGC TGGTGGCCGG GGACGTGCTC ACCGCCGATC CGGTGGTCAA GGAACTGCAG
AGCGTGTCCC GCAGCGCCGT GCTCTTCGAC GTCATCCCCG GACTGTCCGC GACCGCCGTC
GCGTCCTACT CGGGCATCGC CGTCGGCTCG GTGCACACCG TCGCCGACGT GCGGTCCACC
TCGGACTGGC CGCGGCTGGC GGCCGCGCCC GGCACCCTGC TGCTGCAGGC CTCCTCGGGT
CACCTGGCCG ACACCGCCGC CCTGCTGGCC CAGTCCGGGA TGGCGGGGGA GACCCCGGCC
TCGGTGACCT CGGGCGCCAC CCTGCCCACC CAGCGCACCG TCGACGGCAC CCTGGCCACC
CTGGACGGCA TCGGCGGGGA CATGACCGGG CCGCTGGTGG TCACCGTCGG CGCCGGCATC
ACCCAGCGGA ACCGGTTGTC CTGGTGGGAA TCTCGGGCAC TGTACGGCTG GCGGGTGCTG
ATCCCGCAGA CCAAGGACCC GGCCGAGGAG ATGCTCGAAC TGCTGCGCCT GCACGGCGCG
ATCCCGCAGC GGGTGCCGAC CGTCGCGGTC GAGCCGCCGC GGACCCCGGC CCAGATGGAA
CGCGCGGTCA AGGGTCTGGT CGACGGCCGT TACCAGTGGA TCGTGTTCAC CTCGATCAAC
TCGGTCCGCG CCGTCTGGGA GAAGTTCGTC GAGTTCGGCC TGGACGCCCG GGCGTTCTCC
GGCGTGCGGA TCGCCTGCGT GGACAGCGCC ACCGGTGACG CGGTGCGGGC CCTGGGCATC
GTGCCCGAGC TGATCTCCGC CGACCAGCAG TCCTCGGCCG GCCTGCTGTC GACCTTCCCC
GAGTACGACG ACATCCTCGA CCCGGTCGAC CGGGTGCTGC TGCCGCGGGC CGACATCGCC
ACCGAGACCC TGGCCGAGGG CCTGCGCGAG CGGGGCTGGG AGATCGACGA CGTGACCGCG
TACCGCACGG TGCGAGCCGC GCCGCCGGCC GCGCCCATCC GGGAGGCGAT CAAGACCGGC
GGATTCGACG CGGTCTGCTT CACCTCGTCC TCCACCGTGC GCAATTTGGT CGGCATCGCC
GGCAAGCCGC ACGCCCGGTC GCTGGTCGCC TGCCTGGGAC CCAAGACCGC CGAGACCGCG
CGTGAGTTCG GTCTGCGGGT GGACGTGCAG CCCGAGGTCG CCGAACTCGG CGCGCTGGTG
GAGGCCCTGG CCGAGCACGC GTCCCGGCTG CGGGCCGAGG GCGCCCTGCC GCCGCCGCGC
AAGTCGCCGC GGCGCCGCTG A
 
Protein sequence
MTRARKPVGR IAFVGAGPGD PGLLTMRAAH ALDAASLVVT DPDVPADITA LAGEAEVKPA 
VGEPAEVAKA LVAAAKNGQF VVRLVAGDVL TADPVVKELQ SVSRSAVLFD VIPGLSATAV
ASYSGIAVGS VHTVADVRST SDWPRLAAAP GTLLLQASSG HLADTAALLA QSGMAGETPA
SVTSGATLPT QRTVDGTLAT LDGIGGDMTG PLVVTVGAGI TQRNRLSWWE SRALYGWRVL
IPQTKDPAEE MLELLRLHGA IPQRVPTVAV EPPRTPAQME RAVKGLVDGR YQWIVFTSIN
SVRAVWEKFV EFGLDARAFS GVRIACVDSA TGDAVRALGI VPELISADQQ SSAGLLSTFP
EYDDILDPVD RVLLPRADIA TETLAEGLRE RGWEIDDVTA YRTVRAAPPA APIREAIKTG
GFDAVCFTSS STVRNLVGIA GKPHARSLVA CLGPKTAETA REFGLRVDVQ PEVAELGALV
EALAEHASRL RAEGALPPPR KSPRRR