| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0763 |
|---|
| Symbol | |
|---|
| ID | 8446352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 841932 |
|---|
| End bp | 843857 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645039900 |
|---|
| Product | drug resistance transporter, EmrB/QacA subfamily |
|---|
| Protein accession | YP_003200166 |
|---|
| Protein GI | 258651010 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCG CAACCGGGGA AATTCAGGCG GCCCCGACCG CCTCGCCCTC TGGGCTGACC
CACAAACAGA TTCGCTTCAT CCTGTTCGGC CTGATGGCCG GCATGCTGCT GGCCGCCCTG
GACCAGACGA TCGTGAGCAC CTCGATCCGG GTCATCGCCG ACGATCTGCA CGGGCTGTCC
GCCCAGGCCT GGGTGACCAC CGCGTACCTG ATCACCTCCA CGGTGACCAC CCCGCTGTAC
GGCAAGCTCT CGGACATCTA CGGCCGCCGG CCGATGTTCC TGACCGCCAT CAGCATCTTC
ATCTTCGGCT CGCTGCTGTG CACGTTCTCC ACCTCGATGT ACGAGCTGGC CGCCTTCCGG
GCCATCCAGG GCATCGGTGC CGGTGGTCTG TTCTCGATGG CCCTGGCCAT CCTGGCCGAC
ATCGCCCCGC CGCGTGAGCG GGCCAAGTAC CAGGGCTACT TCCTGGCCGT GTTCGGCATG
TCTTCGGTCG TCGGACCGCT GGTCGGCGGG TTCTTCGCCG GCGCCGAGAC GATCCTGGGC
ATCGCCGGCT GGCGCTGGGT CTTCCTGGTC AACGTGCCGA TCGGCATCCT GGCCCTGGTC
ATCGTCAGCA TCACCCTGCA CATCCCGCAC ATGCGGCACG ACCACCGGGT CGACTGGTGG
GGTGCGACCG CGCTCATGGT CGGGTTGGTC CCGCTGCTGA TCGTGGCCGA GCAGGGCCGC
GAGTGGGGCT GGATGTCCGG TTCGGTGCTG GGCCTGATCC TGCTGGGCAT CGTCGGTATC
GCCGCCTTCA TCGCCATCGA GATCAAGATG AAGGACGAGG CGCTGATCCC GATGCGCCTG
TTCCGCAGCC GGGTCTTCTC CACCGGCCTG GGCGCGAACG TGCTCATCGG TCTGGGCATG
TTCGGTGCCC TGTCCACCCT GCCGCTGTAC CTGCAGCTGG TGAAGGGGGC GACCCCGACC
GAGTCGGGCC TGCTGTTGAT CCCGATGATG GTCGGCATCA TGGGCGGCTC GGTGCTCTCC
GGCCAGCTGA CCATGCGCAC CGGTCGGTAC AAGATCTTCC CGGTGATGGG CACCGCCCTG
CTGACCGCGT CGTTCTTCCT GATGCTGACC GTGGACGTGG ACACCGGCTA CCCGCTGCTG
GACCTGTACT TCGTGATGAT CGGCCTGGGG CTGGGCCTGT GCATGCAGAC CCTGCTGATC
GCCGTGCAGA ACACGGTGCC GGCCAAGGAC ATGGGCGTGG CCACCTCGTC CGCGACCTTC
TTCCGGCAGC TGGGCGGCAC CCTGGGTGTT GCGGTGTTCC TGTCGCTGCT GTTCAACTCG
CTGCCTGACA AGATCCAGGG GGCGTTCCAG TCGGCGGCCG GTAACCCGGC GTTCCTGTCG
GCGGTGCAGA CCGCGGCCCA GGATCCGAAC AGCCCGGGCC ACGCCACCGC GCTGGCCCTG
GTCCAGGCGC AGACCAACCC GGCCGCCGCG GCGTCGGTGA CCGATGCGTT CAACAGCGAC
TCGTCGTTCC TGAGCACGCT GGACGCCAAC ATCGCCCGGC CGTTCCAGGA GGGCTACGTC
GCCTCCACCC AGTTGGTCTA CATCATCGGC GGCATCATCA TGGCCGTTGC CTTCGTCCTG
GTGTTGACCA TGAAGGAGCT GCCGCTGCGC ACGCAGTCGG CGATCGACGA GCGGCTGGCC
GAGCAGGCGG CCGAGGCCAA GGACGCCGAG GCGCTCTCGT TCGAGGGTGC CTTCAGCGCG
GTCGACGCCG GCGACGCCAG CACCGCGGCG ACCACCCGGC CGACCACCGA GTCGACCTCC
CCGTCGTCAT CGGGTGGCGG GCGGCATCAG GGTGGCCGGC ACAGTGCGGC CGACGAGGAC
CTGGTCCCGG CGTGGGAGAT CGCCGGCGAC ACGGTCAGTC CGGGCGCCGG TCGGCATCGC
GCCTGA
|
|---|
| Protein sequence | MATATGEIQA APTASPSGLT HKQIRFILFG LMAGMLLAAL DQTIVSTSIR VIADDLHGLS
AQAWVTTAYL ITSTVTTPLY GKLSDIYGRR PMFLTAISIF IFGSLLCTFS TSMYELAAFR
AIQGIGAGGL FSMALAILAD IAPPRERAKY QGYFLAVFGM SSVVGPLVGG FFAGAETILG
IAGWRWVFLV NVPIGILALV IVSITLHIPH MRHDHRVDWW GATALMVGLV PLLIVAEQGR
EWGWMSGSVL GLILLGIVGI AAFIAIEIKM KDEALIPMRL FRSRVFSTGL GANVLIGLGM
FGALSTLPLY LQLVKGATPT ESGLLLIPMM VGIMGGSVLS GQLTMRTGRY KIFPVMGTAL
LTASFFLMLT VDVDTGYPLL DLYFVMIGLG LGLCMQTLLI AVQNTVPAKD MGVATSSATF
FRQLGGTLGV AVFLSLLFNS LPDKIQGAFQ SAAGNPAFLS AVQTAAQDPN SPGHATALAL
VQAQTNPAAA ASVTDAFNSD SSFLSTLDAN IARPFQEGYV ASTQLVYIIG GIIMAVAFVL
VLTMKELPLR TQSAIDERLA EQAAEAKDAE ALSFEGAFSA VDAGDASTAA TTRPTTESTS
PSSSGGGRHQ GGRHSAADED LVPAWEIAGD TVSPGAGRHR A
|
|---|
| |