Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0735 |
Symbol | |
ID | 8446322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 804873 |
End bp | 807245 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645039870 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_003200138 |
Protein GI | 258650982 |
COG category | [R] General function prediction only |
COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.773858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTTCGG TCACATCCTG TGCGTCTCAT GTGCGCCGGC TGCCGCGGGC GGCGGGGTCG CCGGCCCAGT GGCCGGGATG GACGCCTCCG GGTGTCCGGG ACGCGTTGAG GACGGCGGGC ATCGAACAGC CCTGGACGCA TCAGGTGGCG GCGGCGCAGC TTGCCCACGA CGGTCACGAC GTGGTGCTGT CCACCGGCAC CGCATCCGGC AAGTCGTTGG GCTATCACCT GCCGGCCCTG ACCGCGATCG AGAACGACCC GCGGACCACC GTTCTCTACC TCGCCCCGAC CAAGGCCCTG GCCGCCGATC AGCTCGGGGT GCTGACCGGC CTGGCGGTGC CCGGGCTGCG TCCGGCAGTC TATGACGGAG ACACCCCGCG GGACGACCGG GACTGGGCCC GCGGGCACGC GAACTGGCTG CTGACCAATC CGGACATGCT GCACCTGGGG CTGCTCCCCC ATCATTCGGC CTGGGACCGG TTCTGGCGGC GGCTGGCCTT CGTGGTGGTC GACGAATGCC ACGCCTACCG CGGGGTGTTC GGCTCGCATG TTGCGCTCGT CCTGCGCCGG CTGATCCGCG TCGCCCGGCT GTACCGGTCA AGCCCGGTGT TCGTCCTGGC CTCGGCCACC GCGGCCGAGC CGCAGGTGTC GGCGCAGCGG CTGATCGGCC GGCCGGTCCG GGCCGTCACC CAGGACGGCT CGGCCCGGCC CGCGGCCGAC TTCGTGCTCT GGACACCGGG CGCGGCCGGT TCGGACCCCA TCGACTCGGA CAGCGCCGGA TCAGACAGCG CCGACTCGGA CAGCACCGGA TCAGACACAC CCGAATCAGG CATCGAGCAA GCCGCGCAGC CAAGCCGCCG GACGTCCGCG CCGGCCGAGG CCGCGCGGCT GATGGCCGAT CTGGTCGCCG GCGGCGCCCG CACGCTGACC TTCGTCCGGT CCCGGCAGGG CGCCGAGCAG GTCGCGCTGG CCGCGCGCCG GCGGCTGCGC CGGATCGCGC CCGACCTGGC CTCCCGGGTC GCCGCCTACC GCGGCGGGTA TCTCCCCGAG GACCGGCGCG AACTGGAGCG GGCGCTGGAC TCCGGGGAGC TGCTGGGCCT GGCCAGCACC AACGCCCTCG AGTTGGGTAT CGACATCGCC GGGCTGGACG CGGCCATCAT CACCGGCTAC CCCGGCACCC TGGCCGCGCT GTGGCAGCAG GCCGGTCGCG CCGGTCGGGG CGGGGCCAGC GGCCGGCGGG CACTGGTGAT CTTCGTGGCG CGGGAGGACC CGCTGGACAC CTACCTGGTC CGGCACCCGG AGGCGGTCTT CGACCGTCCG GTCGAGAGCA CGGTGATCGA TCCGACCAAC CCGTTCGTCC TCGGGCCGCA TCTGACCTGT GCCGCGGCCG AACACCACCT GACGCCGGAG GACCTGGACC TGTTCGGTGG CCCGGCCGCC CGGCCGGTGC TCGACCAGCT GCTGGACCGG CGGATCCTGC GCCGCCGGCC GAGCGGCTGG TTCTGGGTGA ACCCGGGGCA TCCGGCGCAG CGGGTGGACC TGCGCGGCTC CGGCGCCGGG CAGATCGCGA TCGTCGACGC CGACAGTGGG CGGCTGCTGG GCACGGTCGA CGCGCACCGG GCCCCGTCCT GCGTGCACAC CGGTGCGGTG CACCTGCACC GCGGCGAGTC CTACGTCGTG GACGAGCTCG ATCTTCAGGC CGGCGTGGCC ACCGTGCGCG CGGGGCGACC GGACTGGACC ACGGTCGCCC GCTCGGTGAG CTCGGTGTCG ATGGTCGGCC CGCAGCGGTC CCGGCCGGCC GGACGTCAGG TGCGGGTGGG CGTCGGGCCG GTCGCGCTGA CCACCCAGGT AGTGGGCTAC CTGCGGCGCC GGCCCACCGG GGAGGTCCTG GACCAGGTCC CGCTCGAGCT GCCGCAGCAC ACCCTGCCGA CCCGGGCGGT CTGGTACACC GTCAGCCGAG CGGCCCTGCG CGCCGCCGGA GTGCGGGATG CGGCGATCCC CGGCGCCCTG CACGCGGCCG AACACGCCGC GATCGGTCTG CTGCCGCTGT TCGCCGGTTG CGACCGGATG GACATCGGCG GGCTGTCCAC CGCCGCCCAC CCGGACACCG GCGAACCGAC GGTCCTGGTC TACGACGGCT ATCCGGGCGG CGCCGGCTTC GCCGACCGCG GTTACGACGC GCTGCCCGGC TGGCTCGGCG CCGTCCGGGA CACCGTCGCC GGCTGCCCGT GTGAGGCCGG CTGCCCGTCC TGCGTGCAAT CGCCCCAGTG CGGCAACGGC AATCACCCGC TGGACAAGAC CGGCGCGATC ACCGTGCTGA ACCTGGTCGT CGACGCGCTG CGCACCGCCC CGGCCGAGTC GGTCGGGGCC TGA
|
Protein sequence | MSSVTSCASH VRRLPRAAGS PAQWPGWTPP GVRDALRTAG IEQPWTHQVA AAQLAHDGHD VVLSTGTASG KSLGYHLPAL TAIENDPRTT VLYLAPTKAL AADQLGVLTG LAVPGLRPAV YDGDTPRDDR DWARGHANWL LTNPDMLHLG LLPHHSAWDR FWRRLAFVVV DECHAYRGVF GSHVALVLRR LIRVARLYRS SPVFVLASAT AAEPQVSAQR LIGRPVRAVT QDGSARPAAD FVLWTPGAAG SDPIDSDSAG SDSADSDSTG SDTPESGIEQ AAQPSRRTSA PAEAARLMAD LVAGGARTLT FVRSRQGAEQ VALAARRRLR RIAPDLASRV AAYRGGYLPE DRRELERALD SGELLGLAST NALELGIDIA GLDAAIITGY PGTLAALWQQ AGRAGRGGAS GRRALVIFVA REDPLDTYLV RHPEAVFDRP VESTVIDPTN PFVLGPHLTC AAAEHHLTPE DLDLFGGPAA RPVLDQLLDR RILRRRPSGW FWVNPGHPAQ RVDLRGSGAG QIAIVDADSG RLLGTVDAHR APSCVHTGAV HLHRGESYVV DELDLQAGVA TVRAGRPDWT TVARSVSSVS MVGPQRSRPA GRQVRVGVGP VALTTQVVGY LRRRPTGEVL DQVPLELPQH TLPTRAVWYT VSRAALRAAG VRDAAIPGAL HAAEHAAIGL LPLFAGCDRM DIGGLSTAAH PDTGEPTVLV YDGYPGGAGF ADRGYDALPG WLGAVRDTVA GCPCEAGCPS CVQSPQCGNG NHPLDKTGAI TVLNLVVDAL RTAPAESVGA
|
| |