Gene Namu_0671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0671 
Symbol 
ID8446257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp739378 
End bp740340 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content73% 
IMG OID645039806 
Productcell wall hydrolase/autolysin 
Protein accessionYP_003200075 
Protein GI258650919 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGT GCGCCACGGC GAGCCAGCAG GCCGACCCGC CGAGCACGAG TTTCACGCCG 
ACCAGCAGCG CCGCCTCCTC GGCCAGCCCC ATCACCGTGC CCGGGCTGAG CACCTCGGTC
AGCGAATCTC CCACCCCGAG CCCGACCCCC GAGCCGAGCA CCTCGACGCC GGAGCCGGCA
CCCGAGACGA CCTCGGTGGT GGACGCCCCC GACGACGACT ACACCCCGCC GGTGGAGCAG
CCCACCCCGT TGGAGCCGGT GCAGACGCAG GACCCGGCGA CCCAGGCCCC GGCGCCCGCT
CCCTCCGGCG GCGGCCGGGT GGTGGTCATC GACCCCGGCC ACAACGGGGC CAACGGGGCC
AACCCGGACG TGATCAACGC CCTGGTGGAC GCCGGCTTCG GCGAGACCAA GCCCTGCAAC
ACCACCGGTA CCTCGACCAA CGACGGCTAC ACCGAGCACC AGTTCAACTG GGGGGTGGCC
ACCAAGCTGC AGGCGATCCT GCAGGCCCGC GGGTATGACG TGCGGATGAC CCGCACCAGC
GACGACGGCG TCGGCCCGTG CGTGAACAAG CGGGCCGCGT TCGGCAATGA CGCCAACGCC
GACGCGGTGA TCTCCATCCA CGGCGACGGC GACGACGCCA GCGCCCGCGG CTTCTACGTG
ATGACCGCCG AACGGGCCCC GGCCGGGGCG GCGATGGCCG CCCAGTCCGA GTCGCTGGCC
AGCACCGTGC GCGACGCGCT GGTCAACGAC GGACTGTCCC CGTCCAACCA CCTGGGCTCG
GGCGGGCTGT GGAAGCGCAG CGACCTGGCC GGCCTGAACC TGTCCACCCG GCCCACCGTC
ATGATCGAGA TGGGCAACAT GCGCAACTCC GCCGACGCCG CCCTGATGAG CTCGTCCGCG
GGCCAGCAGC AGTACGCCCA GGGCATCGCC GACGGCGTCA GCGCCTACCT CGGCGCCGGC
TGA
 
Protein sequence
MSACATASQQ ADPPSTSFTP TSSAASSASP ITVPGLSTSV SESPTPSPTP EPSTSTPEPA 
PETTSVVDAP DDDYTPPVEQ PTPLEPVQTQ DPATQAPAPA PSGGGRVVVI DPGHNGANGA
NPDVINALVD AGFGETKPCN TTGTSTNDGY TEHQFNWGVA TKLQAILQAR GYDVRMTRTS
DDGVGPCVNK RAAFGNDANA DAVISIHGDG DDASARGFYV MTAERAPAGA AMAAQSESLA
STVRDALVND GLSPSNHLGS GGLWKRSDLA GLNLSTRPTV MIEMGNMRNS ADAALMSSSA
GQQQYAQGIA DGVSAYLGAG