Gene Namu_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0601 
Symbol 
ID8446185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp662931 
End bp663857 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content69% 
IMG OID645039734 
Productdihydrodipicolinate synthetase 
Protein accessionYP_003200005 
Protein GI258650849 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCG GAAACCTGGA CCTGCGTGGT CTGAACCCCG CCCCGGTCAC CCCTTTCACC 
GTTGACGGCG ACGTCGACTA CGCCGCGCTG GCCGGCCTGG GCAAGTTCCT GGCCTCGGTC
GAGGGGGTCA AGTCGCTGGT CGTGCTCGGG CACGCCGGCG AGGGCACCTT CCTGACCCAG
GACGAGCAGG TCAAGGTGAT CGAGACGCTG GTGGCCGAGG TCGGCGACCA GGTCGCCATC
GTCGCCGGCA TCACCGGCGA GGGCACCAAG GTCGCGGTCG AGGAGGCCCA GCGGGCCGTC
GCCGCCGGCG CCAAGGCGGC CCTGACCTAC CCCTCGCACG GCTGGCTGCG GTTCGGCTAC
CAGGACGGGG CCCCGCAGGA CCGCTACCGC GCCATCTGGG AGGAAGCCGG CCTGCCGCAG
ATCCTGTTCC AGTACCCGGA CAACACCAAG GCCAGCTACA ACCTGGACAC CCAGCTGGAG
ATCGCCGGCC AGGAGGGCGT GTTCTGGACC AAGAACGGCG TGCGCAACAT GCGCCGCTGG
GACACCGAGA TCCCGGTCCT GCGCCGCGAA TACCCCGACC TGCAGATCTT CTCCTGCCAC
GACGAGTACC TGCTGCACAC CATCATGGAC GTCGACGGCC TGCTCGTCGG CTACGGCAAC
ATCGCCCCCG AGCTGCTGGT CGAGTTCATC AAGGCCGGCA AGGCGCAGGA CTGGACCGCG
GCCAAGAAGA TCCACAACCA GCTGCTGCCG GTGACCAAGT CGGTCTACCA CCGCGGCTCG
CACATGGAGG GCACCGTCGC CCTCAAGCAC GCCCTGGTCG CCCGCGGCAT CCTGCCGCAC
GCCACCGTCC GCAGCCCGCT GCTGCCGCTG GCCGACGGCG CCGACGTCGA GATCGCCGAC
GCCCTCAAGG CTGCCGGCAT CATCTGA
 
Protein sequence
MSLGNLDLRG LNPAPVTPFT VDGDVDYAAL AGLGKFLASV EGVKSLVVLG HAGEGTFLTQ 
DEQVKVIETL VAEVGDQVAI VAGITGEGTK VAVEEAQRAV AAGAKAALTY PSHGWLRFGY
QDGAPQDRYR AIWEEAGLPQ ILFQYPDNTK ASYNLDTQLE IAGQEGVFWT KNGVRNMRRW
DTEIPVLRRE YPDLQIFSCH DEYLLHTIMD VDGLLVGYGN IAPELLVEFI KAGKAQDWTA
AKKIHNQLLP VTKSVYHRGS HMEGTVALKH ALVARGILPH ATVRSPLLPL ADGADVEIAD
ALKAAGII