Gene Namu_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0523 
Symbol 
ID8446106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp581759 
End bp582451 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID645039658 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003199930 
Protein GI258650774 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAT CCGCCGACGC GCTGCGGGTG GTGCTCGCCG ACGACGAGGC GCTGGTCCGG 
GCCGGCCTGC GGATGCTGAT CGACGGTGAG CCGGACATGC AGGTGGTCGG GGAGGCCGGT
GACACCGCCG CCGTGGTCGC GGTGGTCGGG CGCACCCGCC CGGACGTGGT GCTGATGGAC
GTGCGGATGC CGGGCGGCGG CGGCATCGAG GCCACCCGGC GGTTGGCGGC GCAGAGCCCG
CAGGTGCGGG TGATCGTGCT GACCACGTTC GACGAGGACG CTGCCATCGA CGGGGCGTTG
CGGCTCGGGG CGGCGGGGTT CCTGCTGAAG ACCTCACCGC CGGAAATGCT GCTCGACGCG
ATCCGCCGGG TCGCCGCCGG GGGCGGGCAA CTGGACCCGA TGGTGGTGCC GCGGGTCATC
GCCGGGTACG CCGCCGCACC CCGGATGGGG GAGCGGGCCC CCGAGCTGGA CCGGTTGACC
CCCCGGGAAA CCGAAGTGCT GCAACTGGTT GCCCGGGGAC ACAACAACGC CGAGATCGCG
GCACTGTTGC ACTTGGGCGA GACCACGGTG AAAACCCACC TCGGACGGGT GCTCGACAAG
CTGGGTTTGC GAGACCGCAA CAAGGCCATC GCCTTTGCCT ACGACAGCGG GCTGGTCACA
CCGGATGCCG GCGGCCCGCC CCGGCGACGA TGA
 
Protein sequence
MTTSADALRV VLADDEALVR AGLRMLIDGE PDMQVVGEAG DTAAVVAVVG RTRPDVVLMD 
VRMPGGGGIE ATRRLAAQSP QVRVIVLTTF DEDAAIDGAL RLGAAGFLLK TSPPEMLLDA
IRRVAAGGGQ LDPMVVPRVI AGYAAAPRMG ERAPELDRLT PRETEVLQLV ARGHNNAEIA
ALLHLGETTV KTHLGRVLDK LGLRDRNKAI AFAYDSGLVT PDAGGPPRRR