Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_0444 |
Symbol | |
ID | 8446025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 482863 |
End bp | 484392 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645039579 |
Product | hypothetical protein |
Protein accession | YP_003199853 |
Protein GI | 258650697 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAAA ACAACACCGC CACCGCGCAT TCCGGCGGCT ACCTGCCCGA CGAAGCGAAG CGCAAGGACC GGCGCACCGC CAGACGGGAC TGGCGCGCCG CCGCGGACCA GCTTGTCCGG GAGCAGCAGG ACCTGGCCGC CGCCGCGAAG GCCGCGGAGG TGTCGATGCG GAGGGCGGAG TACCGGTCCC GGACCCCGAA GGCCGGGGAG AAGCGATCCT GGGCCGGCCG CACCGCCCAC GGCCTGAAGT TGCGGAAGCA TCGGGCGACG ACGGCGAACC TGTCGCACGT GTACCCGTTC CTGGCCGACG GCGGCCTCGG CTCCACCGGT GTGTATGTGG GTCGGGACTC GTATTCGGGG GCGTCGTTCT GCTACTGCGG GTTCGACCTG TACAACCGGC GACCCCGCCT GGTGTCCAAC ACGAACATCA TGATGGTCGG AAACATCGGC TGGGGAAAGA CCAACACGGC AATGGCCCTG GCCGTGCGGA ACCTGCCGTT CGGCCGACGC ATCGTCGTCC CCGGCGACCC CAAGGACGAC TGGCTCCGCC TGGCCATCGC CCTGGGCGGC CAGGGCATCC GACTGGGCCG CGGCCTCCCC GCCCGGCTCA ATCCCCTGGA CGGCGGTGTC AAGCCGGCGG GGAAGGACCC GGCGATGTGG GAGCGCGAGG TGTGGTCCCG CCGGCAGAAG CTCCTCGTCG CCCTGGTCGC CACCGCCGCA CCCGCGATCG CACCCCTGGA ACCGCTCGCC GTCGCCGCCC TCGACCTCGC GCTGGCCGCC GCCGTCCAGC ATTCGGGCAC CCCGACCCTG CCGGACGTCG CCCACCACCT CGCCGCGCCC GACCCGGACC GGGCGAAGCT GGCGGGGTAT GACGCGGAGT TGCTGCGGCA CCGCGGGCAA CCGGTCTATG CGGTGTTGTC GTCGCTGATC AACGGTCATC TCGGTGGCCT GTTCGAAGGG CCGTCGACGG TGCGGTTCGA CCCGTTGGCG CCGATGATCG CGCTCGGCTC CGCCGCGTTG GGGGATGACG ATCTGCTGCA GTCGCTGGTG ATGCTGTGCT GCTCGGCGTG GGTCGGGTCG ACGATGTCGG ATCCGGCGTT CGGGCAACGC CTGTTCGTGT ACGACGAGGC GTGGCGGATC ATCAGCGGCG AGGCCCAGCT GGACCGGATG AACGCCGACC TGCGGCTGTC CCGGCACTAC GGCATCGCGA ACATCCTGGC CATGCACGCC CTGTCCGACC CGGACAAGGT CGGCCACGCC GACTCCGCCG CCGTCAAGAA GGCCCAAGGG CTCCTGTCGT TGTGCGACAC CAGGGTGGTA TTCCGGCAGG CCCCCGGCGA ACTCGACCGC GCCACCGCCG ATCTCGCGCT GACCCAGGCC GAACGGGAAG TCGTCGCCGG TGCCGGCGTC GGCGAAGCCC TCTGGAAACT CCCCACCAAG TCGTTCCGGG TGCAGACCAT CCTGTCCGAC CGCGAAAAGC AGATGTTCAA TACCGATCAG CGCATGACCA ACATCTCGAA AGCCCTGTGA
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Protein sequence | MRENNTATAH SGGYLPDEAK RKDRRTARRD WRAAADQLVR EQQDLAAAAK AAEVSMRRAE YRSRTPKAGE KRSWAGRTAH GLKLRKHRAT TANLSHVYPF LADGGLGSTG VYVGRDSYSG ASFCYCGFDL YNRRPRLVSN TNIMMVGNIG WGKTNTAMAL AVRNLPFGRR IVVPGDPKDD WLRLAIALGG QGIRLGRGLP ARLNPLDGGV KPAGKDPAMW EREVWSRRQK LLVALVATAA PAIAPLEPLA VAALDLALAA AVQHSGTPTL PDVAHHLAAP DPDRAKLAGY DAELLRHRGQ PVYAVLSSLI NGHLGGLFEG PSTVRFDPLA PMIALGSAAL GDDDLLQSLV MLCCSAWVGS TMSDPAFGQR LFVYDEAWRI ISGEAQLDRM NADLRLSRHY GIANILAMHA LSDPDKVGHA DSAAVKKAQG LLSLCDTRVV FRQAPGELDR ATADLALTQA EREVVAGAGV GEALWKLPTK SFRVQTILSD REKQMFNTDQ RMTNISKAL
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