| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0416 |
|---|
| Symbol | |
|---|
| ID | 8445997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 450572 |
|---|
| End bp | 451228 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645039553 |
|---|
| Product | ThiJ/PfpI domain protein |
|---|
| Protein accession | YP_003199827 |
|---|
| Protein GI | 258650671 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 84 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA CCCGAGACCA CGTGGCAGAC GACTCGGTGC CCCGCGACCC GACACCTGGC
GACCGGCGGC GGCGCCAGAT CGGGATCCTG CTGTTCGACG GCGTCGAAGA GCTGGACGCC
GTCGGCCCCT GGGAGGTGCT GTCCACCTGG ACCCAACAAC ACCCCGACGA CGGCTGGGAC
GCCTTCTGCC TTTCCTCGGA CGGCCGCCCC GTCCGCAGCG CCAAGACCCT GGTCATCGGC
GCGCACCACT CGATCGACGA CGCGCCGGTC ATGGACATCC TGGTTCACCC CGGTGGCCCG
GGCACCAGAC CGATGCTGCG CAACCGTGGC CACCTCGACT GGGTCCGCCG GCAGCGCGCC
ACGGTTCCCC TGATGACATC GGTCTGCACC GGCAGCCTGG TCTACGCGGC CGCCGGGTTG
CTGGTGCGCC GCAGGGCGAC CACGCACTGG GCCTGGCTCA ACCTGCTCTC CGAGATGGAC
CCGACGGTCA TCACCGACGT CAGCTCGCGA TTCGTCGACG ACGGCGACCT CATTACCAGC
GCCGGGGTCA GCGCCGGCAT CGACATGGCG CTGCACCTGG TGGCCCGGCT CACCGACGTC
GAACGTGCTC GGGAGATCCG CCGCGACATC CAGTACAACC CTCTGCCCCC CGTCTAG
|
|---|
| Protein sequence | MNDTRDHVAD DSVPRDPTPG DRRRRQIGIL LFDGVEELDA VGPWEVLSTW TQQHPDDGWD
AFCLSSDGRP VRSAKTLVIG AHHSIDDAPV MDILVHPGGP GTRPMLRNRG HLDWVRRQRA
TVPLMTSVCT GSLVYAAAGL LVRRRATTHW AWLNLLSEMD PTVITDVSSR FVDDGDLITS
AGVSAGIDMA LHLVARLTDV ERAREIRRDI QYNPLPPV
|
|---|
| |