Gene Namu_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0405 
Symbol 
ID8445986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp437222 
End bp438535 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content66% 
IMG OID645039543 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_003199817 
Protein GI258650661 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGCT CCCCCCGCAC GTTGTTCTCA CCCGGGACGT GGGCCGAGGA CGGTCGTGTC 
GCCCATATCC TCCGCAAGGA AACAGTCGGC GGTGGCCTGT TACTCCTGGC AACAGTGGTG
GCCCTGGTCT GGGCCAACAC AGCGGTTTCG GAAAGCTACT TCCAACTGTT GGATACCGAG
CTCGGACCTG CTGCACTGCA TCTGAACCTC ACGGTCGGCG AGTGGGCCGG CGACGGGTTG
CTGGCGATCT TCTTCTTCGT CGCCGGGTTG GAACTCAAAC GCGAGTTCGT GGCCGGTGAC
CTTCGGGACC CGCACCGCGC CGTGGTACCG GTGGCCGCCG CATTCGGCGG GATGATCGTC
CCCGCCCTGC TGTATCTGGT GATCGCCGGC GGAACCGGCC CTAAGGGGTG GGCGATCCCG
ACCGCCACGG ACATTGCCTT CGCGTTGGCT GTGCTGGCGG TCATCTCCAC CCATTTGCCG
GCGGCGTTGC GAACCTTCCT GCTCACCCTG GCCGTTGTCG ACGACCTGCT GGCCATCACG
ATCATCGCCG TGTTCTATAC CGACGACCTC CAACCGGTGT GGCTGCTGCT CGCGCTGGCG
CCGTTGGCCC TGTTCACGGT CCTGGTGCAG AGAAGAATCA GTTCCTGGTG GCTGCTGCTG
CCGCTGGCGT TCGTCACCTG GTCGTTGGTG CACGCGTCGG GGGTGCACGC CACCGTCGCC
GGGGTGCTGC TCGGGTTCGC GGTCCCGGTG CGCGCCCGGA AGGTCAGAGG CAAGGACGAT
GACCGACCGG GGATGGCGGA GCACTTCGAG CATCTCTGGC GGCCCATTTC CGCCGGGATC
GCGGTGCCGG TGTTCGCCTT GTTCTCGGCC GGCGTCGCGA TCGGTGGTTG GTCCGGTTTG
CGGTCAGCGT TGACCGACCC GATCGCGGTC GGCATCATCG CCGGTCTGGT CCTGGGGAAA
CCGGTCGGCA TCCTGACCGC TACCTATCTG ACGTCGAGAC TCACCCGCCG TCCGTTGCAG
AGGGGGCTGA CCTGGCCCGA TCTGACCGGG GTGGCCCTGC TCGGCGGTGT CGGCTTCACC
GTGTCCCTGT TGATCGGGGA ACTCGCCTTC GGCGGTAGCT CCGCCGCCGA CGATCACGTC
AAGATCGCCG TCCTGGCCGG ATCGGTGACG GCCGCTGTGC TGGCGGCGGT GCTCCTGCGG
ATGCGGAACC GCCGCTACCG CGCCATCTGC GAGGAGGAGG AACGAGACGA CGACCACGAC
GGAATCCCCG ACATCTATCA GATGAGAACG CCTTTGGACC CACCCGAATC GTGA
 
Protein sequence
MVGSPRTLFS PGTWAEDGRV AHILRKETVG GGLLLLATVV ALVWANTAVS ESYFQLLDTE 
LGPAALHLNL TVGEWAGDGL LAIFFFVAGL ELKREFVAGD LRDPHRAVVP VAAAFGGMIV
PALLYLVIAG GTGPKGWAIP TATDIAFALA VLAVISTHLP AALRTFLLTL AVVDDLLAIT
IIAVFYTDDL QPVWLLLALA PLALFTVLVQ RRISSWWLLL PLAFVTWSLV HASGVHATVA
GVLLGFAVPV RARKVRGKDD DRPGMAEHFE HLWRPISAGI AVPVFALFSA GVAIGGWSGL
RSALTDPIAV GIIAGLVLGK PVGILTATYL TSRLTRRPLQ RGLTWPDLTG VALLGGVGFT
VSLLIGELAF GGSSAADDHV KIAVLAGSVT AAVLAAVLLR MRNRRYRAIC EEEERDDDHD
GIPDIYQMRT PLDPPES