Gene Namu_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0231 
Symbol 
ID8445811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp259984 
End bp261246 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content71% 
IMG OID645039376 
Productseryl-tRNA synthetase 
Protein accessionYP_003199651 
Protein GI258650495 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACC TGCGCATCGT TCGTGACGAC CCCGACCGTG TCCGCGCCTC CCAGCACGCT 
CGTGGGGAGG ATTCCGGGGC GGTCGATCGG CTGCTGGCGG CCGACGCGGA CCGCCGGGCC
GCGGTCGCCC GGGCCGACTC GCTGCGCGCC GAGCAGAAGT CCTACGGCCG GACGATCGGC
CAGGCGAGCA AGGACGAGCG GCCGGCCCTG CTGGAGCGGG GCAAGGCGAT GGCGGCCGAG
GTCAAGCTGG CCGAGGCGGC CGAGCAGGAG GCCAACGCCG CCCTGGCGGT GGCCCACCGG
TCCATCGCCA ACATCATCGA GGGGGCCCCG CCCGGCGGCG AACAGGACTA CCTGGTGGTC
AAGGAGGTCG GCAGGCCGAC CGAGTTCGAC TTCACCCCGC GGGACCACGT CGAGCTGGGC
GAACGTCTCG GCGCGATCGA CATCGAGCGG GGCACCAAGG TGTCCGGGGC CCGCTTCTAC
TTCCTGCGGG GGGTCGGCGC GCAGCTGCAG TGGGCGCTGC TGAACCTGGC GGTGAGCACC
GCGATCGGGC ACGACTTCGT GCCGATGATC CCGCCGGTGC TGGTCAAACC GGAGGCGATG
GAAGGCACCG GCTTCCTCGG GGCGCACGCC GACGAGATCT ACCGGCTCGA GGCCGACGAC
ATGTACCTGG TCGGCACCGC CGAGGTGCCC CTGGCCGGCT ACCACGCCGG CGAGATCCTC
GACCTGTCCG CCGGTCCGCT GCGCTACGCC GGCTGGTCGT CGTGCTTCCG GCGGGAGGCC
GGTTCCTACG GCAAGGACAC CCGCGGCATC CTGCGCGTGC ACCAGTTCGA CAAGGTCGAG
ATGTTCGTGT TCTGCAAGCC GGAGGACGCG GCCGATCAGC ACGCCCAGCT GCTCTCGTTC
GAGGAGCAGA TGCTGGCCCA GATGGAACTG CCGTACCGGG TGATCGACAC GGCGGCCGGT
GATCTGGGCT CGTCCGCGGC GCGCAAGTTC GACTGCGAGG CCTGGGTGCC GACCCAGCAG
ACCTACCGTG AGCTGACCTC GACCTCGAAC TGCACGACGT TCCAGGCCCG GCGGCTCGGG
GTGCGGTACC GGGACGAGGA CGGCAAGCCG CAGGTCGCGG CCACCCTCAA CGGCACCTTG
GCCACGACCC GGTGGTTGGT CGCGATCCTG GAGAACCACC AGCAGGCGGA CGGTTCGGTG
CGGGTGCCCA AGGCCCTGCA GCCCGGGCTC GGCGGCCGCG AAGTGCTGGA GCCGATCGGG
TAG
 
Protein sequence
MIDLRIVRDD PDRVRASQHA RGEDSGAVDR LLAADADRRA AVARADSLRA EQKSYGRTIG 
QASKDERPAL LERGKAMAAE VKLAEAAEQE ANAALAVAHR SIANIIEGAP PGGEQDYLVV
KEVGRPTEFD FTPRDHVELG ERLGAIDIER GTKVSGARFY FLRGVGAQLQ WALLNLAVST
AIGHDFVPMI PPVLVKPEAM EGTGFLGAHA DEIYRLEADD MYLVGTAEVP LAGYHAGEIL
DLSAGPLRYA GWSSCFRREA GSYGKDTRGI LRVHQFDKVE MFVFCKPEDA ADQHAQLLSF
EEQMLAQMEL PYRVIDTAAG DLGSSAARKF DCEAWVPTQQ TYRELTSTSN CTTFQARRLG
VRYRDEDGKP QVAATLNGTL ATTRWLVAIL ENHQQADGSV RVPKALQPGL GGREVLEPIG