Gene Namu_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0210 
Symbol 
ID8445790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp238680 
End bp239564 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content75% 
IMG OID645039357 
ProductDNA-(apurinic or apyrimidinic site) lyase 
Protein accessionYP_003199632 
Protein GI258650476 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGC TCCCGGAGGT CACCGCGCTG GCCGCGTTCC TGACCGAGCA CGCCGGCGGG 
CAGCGCATCA CCGCGGTGAG CGTGGCCGCA CTCAACGTGC TCACCACCTA CGACCCGCCC
GCGTCCGCCC TGGTCGGCCG GACCGTGACC GGGGCCGGCC GGCACGGCAA GTTCCTGGAC
CTGGTCACCG CCCCGGGCCC GGACGCGTCG CCGGGGACCC CGGACGCGCT GCACCTGATC
CTGCACCTGG CCCGGGCCGG GTGGCTGCGC TGGTCGGACG CCATCTCGCC GCGGCCGCCG
AAGATGGGTG GGCCGATCGC CCTGCGGGTC GCCCTCAGCG GCGGCGGCGG GTTCGACGTG
ACCGAGGCCG GCACCAAGAA GTCGGTGACG GCGGCGGTGG TGACCGACCC GCGAGCGGTC
CCCGGGGTGG CCCGGCTCGG CCCGGACGCG CTGGACCTGG ACCGCGCGGC GCTCGCGCAG
GTGCTGGCCA CCCAGACCGG CCGGATCAAG AACGTGCTCA CCGACCAGCG GGTGATCGCC
GGCGTCGGCA ACGCTTACTC GGACGAGATC CTGCACACCG CGCGGCTCTC GCCGTTCGCG
ACGGCGGCCA AGCTGTCCCC GGACGAGCTC GATCGGCTCT ACGACGCGCT GGCCACCGTG
CTCACCGACG CCGTGCTGCG CTCGGTCGGC GGTCAGGCCG CCCGGCTCAA GGGGGAAAAG
CGCACCGGGC TGCGGGTGCA TGCGCGCACC GGCCTGCCCT GCCCGGTCTG CGGGGACGTC
GTCGCCGAGG TCTCGTTCGC CGACCGGTCC TTCCAGTACT GCCCGACGTG CCAGACCGGC
GGCAAGAAGC TGGCCGACCG CCGGCTGTCC CGGCTGGTCA AGTAA
 
Protein sequence
MPELPEVTAL AAFLTEHAGG QRITAVSVAA LNVLTTYDPP ASALVGRTVT GAGRHGKFLD 
LVTAPGPDAS PGTPDALHLI LHLARAGWLR WSDAISPRPP KMGGPIALRV ALSGGGGFDV
TEAGTKKSVT AAVVTDPRAV PGVARLGPDA LDLDRAALAQ VLATQTGRIK NVLTDQRVIA
GVGNAYSDEI LHTARLSPFA TAAKLSPDEL DRLYDALATV LTDAVLRSVG GQAARLKGEK
RTGLRVHART GLPCPVCGDV VAEVSFADRS FQYCPTCQTG GKKLADRRLS RLVK