Gene Namu_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0201 
Symbol 
ID8445781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp225775 
End bp226728 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content71% 
IMG OID645039348 
ProductProline dehydrogenase 
Protein accessionYP_003199623 
Protein GI258650467 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTGT TGCGCAAGCC GATCCTGGCC CTGTCCGGCA ACACCGCGGT GCGGGACGCC 
CTGACCAGCA CCTCGCTGAC GGCTTCGGTG GTGGACCGGT TCATCGCCGG GGAGACCACC
GCGGACGCGG TGGCCGCGGT CAGCCGGCTC CGTCCCGACG GGCTGCAGGT CAGCCTCGAT
CATCTGGGCG AGGACACCAC CGACCGGGCG ACGGCGGATG CCACCGTCGA GGCGTACCTG
CAGCTCATCG AGGCGCTGGC CGCGGCCGGT CAGGTGGCCG GAGCCGAGTT GTCGGTCAAG
CTCTCGGCCG TCGGGCAGGC CCTGATCGCC TCCCCGGACC TGCCGGCCGG TGGGAACGCC
TACGCCCTGG CCGGGGCCAG GCGGATCACC GACGCCGCCT ACGCCGCCGG TGCCCGGGTG
AACCTGGACA TGGAGGACCA CACCACGGTC GACCAGACCC TGGAGGTGCT CTTCGAACTT
CGCCGGGCCC ACCCCGACGT GGGTGTCGCC ATCCAGGCGA TGCTCCTGCG CACCCCGAAG
GATCTGGCCG AGCTGACCGG GCCCGGATCG CGGGTCCGCC TGGTCAAGGG GGCCTACCAC
GAGCCGGCCG AGGTCGCCTA CACCGATCCG GCGCAGATCG ACCTGGCCTA CGTGCGGGCG
ATGAAGCTGC TCATGCACGG CAAGGGTTAC CCGATGATCG CCTCCCACGA CCCCCGGCTG
GTGGCGATCG CCGACCGGTT GGCCGCCGAC GCCGGCCGGA GTCCGGACCG TTGGGAGCAC
CAGATGCTCT ATGGGATCCG GCCGGACGAG CAACGCCGGC TGGTCGCCGC CGGCAAGCAG
GTGCGGGTGT ACGTGCCCTA CGGCTCGGAC TGGTACGGCT ACTTCACCCG GCGGCTGGCC
GAGCGCCCGG CCAACCTGCT GTTCTTCCTG CGCTCGTTGA CCTCCAAGGG TTGA
 
Protein sequence
MFLLRKPILA LSGNTAVRDA LTSTSLTASV VDRFIAGETT ADAVAAVSRL RPDGLQVSLD 
HLGEDTTDRA TADATVEAYL QLIEALAAAG QVAGAELSVK LSAVGQALIA SPDLPAGGNA
YALAGARRIT DAAYAAGARV NLDMEDHTTV DQTLEVLFEL RRAHPDVGVA IQAMLLRTPK
DLAELTGPGS RVRLVKGAYH EPAEVAYTDP AQIDLAYVRA MKLLMHGKGY PMIASHDPRL
VAIADRLAAD AGRSPDRWEH QMLYGIRPDE QRRLVAAGKQ VRVYVPYGSD WYGYFTRRLA
ERPANLLFFL RSLTSKG