Gene Namu_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0175 
Symbol 
ID8445755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp196435 
End bp197328 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content71% 
IMG OID645039322 
Productprotein of unknown function DUF427 
Protein accessionYP_003199597 
Protein GI258650441 
COG category[S] Function unknown 
COG ID[COG2343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGA CGACCGGAAC CAGCCCGGTC GGACCCCGCC CGGCCGGGCG GTTCAACAAG 
CCGATGCCGG ATTCCGCCGG CCTGTTCTAC CTGGAGCCCT GCCGCCCGCG GATCCGCGGC
CAGTCCGGTG ACGTCATCGT GGTGGACAGC ACCGCGGCGT CGCTGCTGCA CGAGCACGGG
CAGCTGCCGG TGCTGTACTT CCCGGTCGAT GATGTCCGTA CCGATCTGCT CGAGCCCAAC
GGCACCCGTG CGCACAGTCC GGGCAAGGGG GAGGCGACCG GGCTGCGGCT CTCCGTGGGC
GACCGGGTGG TGCAGGACGC CGGTTGGCGG TTCGACCAGC CGGAGTGGGA CGCCCTGGCC
GGACTGATCG CCTTCTACCT GCCCGCCATG ACGCAGTGGT GGCAGGAGGA CGAGCCGATG
CCGGGGCATG CCCGCGATCC CTACCACCGG ATCGAGGTGC TCGATACCTC CCGTCGGGTA
AGGGTTCTCG TCGAGGGACG GGTGCTCGCC GACACCACCC GAGCCCGGGC GCTGTTCGAG
AGCGGGCTGC CGACCCGCTG GTACATCCCG CCGCGGGACG TCGATGCGAG CCTGCTGGCG
GACAGCGCGA CCCGGACGAC CTGCGCCTAC AAGGGCCAAG CCAGGTACGT GAGCATGCGC
GTGCGCCCGG ACCAACCTGA CGACAAGCAG CCCGACCTGG CCTGGATCTA CGACGAACCG
CTGCCCGACG CGGCGCGCGT CGCCGGGTAC GTCTGCTTCT GGAACGAGCG GGTCGACCTG
GAGATCGACG GTGAGCCGGT GCCGCGTCCG GTCACCGAAT TCCTGGGCGG ACCGACTCCG
CTGCTCGGTC TGCTGCCGCC GGCCATGCTG GAGCGCCCGC GACCGGCCGA CTGA
 
Protein sequence
MSLTTGTSPV GPRPAGRFNK PMPDSAGLFY LEPCRPRIRG QSGDVIVVDS TAASLLHEHG 
QLPVLYFPVD DVRTDLLEPN GTRAHSPGKG EATGLRLSVG DRVVQDAGWR FDQPEWDALA
GLIAFYLPAM TQWWQEDEPM PGHARDPYHR IEVLDTSRRV RVLVEGRVLA DTTRARALFE
SGLPTRWYIP PRDVDASLLA DSATRTTCAY KGQARYVSMR VRPDQPDDKQ PDLAWIYDEP
LPDAARVAGY VCFWNERVDL EIDGEPVPRP VTEFLGGPTP LLGLLPPAML ERPRPAD