Gene Namu_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0100 
Symbol 
ID8445680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp111641 
End bp112648 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content73% 
IMG OID645039248 
ProductPirin domain protein 
Protein accessionYP_003199523 
Protein GI258650367 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG TCGAAACCGA CCCCGCCGAA CTCGTCTGCC GCAGCGGAGC CAGCGGCTCC 
GGCGCGGCCG GACCGGTCGA GATTCTCGAA CCCCGGGACG TCCCGCTCGG CGGGATCCGG
GCCATGACGG TCCGGCGCAC CCTGCCGCTC AAGCAGCGGT CGCTGATCGG GGCCTGGTGC
TTCGCCGACC ACTACGGCCC GGACCGGGTG GCCGACAGCG GCGGCATGGA CGTCGCCCCG
CACCCGCACA CCGGTCTGCA AACGGTGAGC TGGCTGTTCG AGGGCGAGAT CGAGCACCGC
GACTCGCTCG GCTCACACGC GATGGTCCGA CCCGGTGAGC TCAACCTGAT GACCGCCGGC
CAGGGGATCT CGCATTCCGA GGTGTCAACG CCGGCCACCC AACTCCTGCA CGGCGTCCAG
CTGTGGGTGG CGCTGCCCGA CGCGGCCCGG CAGATCGCGC CGTCCTTCGA GCACGTCGTG
CCCGACGACG CACGCGACGG TGACGTCCGT TGCCGGGTGT TCATCGGCTC CTGGCTCGGG
CTCTCCTCGC CGGCCACGGT GCACTCGCCG TTGCTGGGCG CCGAGCTGGT GCTGGCCCCC
GGCGCCCGCA CCGAGTTGCC GCTGACCGCC GAGTTCGAGC ATGGCTTTCT GGTCGACTCC
GGGGACGTCC GGGTGGACGG TGCGCCCGTC GGCCGGGCCG CGATGGCGTA CCTGCCGCCC
GGCACCCGCA CGGTGTCGTT GAGCAACGGG GCCACCCCGG CCCGCTTGGT TCTGCTCGGC
GGGGAGCCGC TGCGCGAGGA GATCGTCATG TGGTGGAACT TCATCGGCCG CAGCCACGAC
GAGGTGGTCG CGTTCCGGCA GCAGTGGCAG GACGAGATCG CCGCTTTCGC CGCCGGTTCC
GCGCCCGTTA CCCGCTTCGG CCGGGTGGTC GGCTATCCCG GCCGGCCGTT GCCGGCCCCG
GAGATGCCGG CGATCCGCCT GCGGCCGCGC CCGTCGCCCG GTCGCTGA
 
Protein sequence
MTNVETDPAE LVCRSGASGS GAAGPVEILE PRDVPLGGIR AMTVRRTLPL KQRSLIGAWC 
FADHYGPDRV ADSGGMDVAP HPHTGLQTVS WLFEGEIEHR DSLGSHAMVR PGELNLMTAG
QGISHSEVST PATQLLHGVQ LWVALPDAAR QIAPSFEHVV PDDARDGDVR CRVFIGSWLG
LSSPATVHSP LLGAELVLAP GARTELPLTA EFEHGFLVDS GDVRVDGAPV GRAAMAYLPP
GTRTVSLSNG ATPARLVLLG GEPLREEIVM WWNFIGRSHD EVVAFRQQWQ DEIAAFAAGS
APVTRFGRVV GYPGRPLPAP EMPAIRLRPR PSPGR