| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0081 |
|---|
| Symbol | |
|---|
| ID | 8445660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 90500 |
|---|
| End bp | 92059 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645039230 |
|---|
| Product | protein serine/threonine phosphatase |
|---|
| Protein accession | YP_003199506 |
|---|
| Protein GI | 258650350 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATC AACTGGCCTA CGCCGCCCGT ACCGACCGCG GCCTGGTCCG CGCGAGCAAT
CAGGACGCGG TCTTCGCCGG CAACACCCTG CTGGTGGTGG CCGACGGCAT GGGCGGCCAC
GCGGCCGGCG ACATGGCCTC CCGGCTAGTG GTGAACGCCT TCGTGCCGCT GGACGCGCGC
GATCCCGGCG GCGACCTGCT GCGCGCGCTG GCCAAGGCGA CCCGCGAGGG CAACCGGTCG
ATCTCCGCGG TGGTGCACGA CAACCCCGAG CTGGACGGCA TGGGGACCAC CGTCACCGCC
CTGCTGTTCG ACGGCGGCCG GCTGGCCATG GCGCACGTCG GCGACTCCCG GGCCTACCTG
TACCGCGACG GCATCCTGCA CCAACTCACG CACGACGACA CCTTCGTCCA GTCGCTGATC
GACGACGGCC GGATCACCCA GGAAGAGGCG AGCCACCATC CGCAGCGTTC GTTGCTGCTG
CGCGCCCTCA ACGGGACGGA GGTCGACCCG GCCCTGACCA TTCGTGAGGT CAGCGTCGGT
GATCGGTACC TGATCTGCTC GGACGGGCTG TCCGGGGTGG TCTCCGCCGA GGCGATCGCC
GAGGCCCTGG CCGACCCGGA CCCGGGGGCG GCCGCCGATG CGCTGGTGCA GTTCGCGCTG
GCCGGCGGCG GCCCGGACAA CGTGACGGTG ATCGTCGCCG ACGTCATGGA CACCGGCCTG
GGTGACGGCC CGACGGCGCT GGCCGCGCCC CCGCTCGACC CCGACGCCAC CGGACCGATC
GGCGCACTGC CCTCCATCCG GATGACGGCC GAGATGCCGC GGATCCCGCT GCCCGGCATA
CCCGAAGAGG CCGCCGCGCC GGCCGAGTTC ATGCCGCCGG ACGAGGACAT CACCGCCCCG
ATCGCGACCA GCGGCCCCGA CCCGGACAGC CCACCGGCCC GGCGTCGACG GCGCCGGACC
ACCCTGGTCC TGGTCGCGGT CATCGTCGTG CTGGGGGTCG CCGGCCTGAT CGGCTCGATC
CTGTGGGTGC GCACCCAATA CTTCGTCGGC GAGAGCGCCG GTCAGGTGGT CGTCTACCGC
GGGGTGGATG GCTCCGTGCT GGGCTTCGGG CTCTCCAGCG TGCAAGAGGG CTCCTGCCAG
CCCGGGCTCA ACGGCTGCGC CCCGCTGATG GTCGAAGATC TCGTCCCGGC CGCCCGGGAT
CAGGTGGTAG CCGGCATCCA GGCCGGCAGC CTGGACGACG CCCGCGCGGT CATCGCCCGG
CTGGCCGGCC AGATGCTGCC CATCTGCCCC ACCGTGACCG AGCCGAGCAC CACCCCCACC
GCAGCCCCGA CCGCCATCCC GACCCTGACC ACGACGCCGA CGACCGTCAC CCCGCTCGTG
CCCGGAGCCA GCGCGGCGCC GCCGTCGACC CCGGCCAACC CGACCGCCTC GCCCGCGCCC
AGCGGGGTGA GCACAGACAC CGGGACGGCC TTGTCGACCA CCACCGGGAC GGCGACGAGC
GGGACACCGC TGTCCACCAG GGCCTTGGAG CCCGGCGTGA CCTGCCGGGT GCCCAAGTGA
|
|---|
| Protein sequence | MTHQLAYAAR TDRGLVRASN QDAVFAGNTL LVVADGMGGH AAGDMASRLV VNAFVPLDAR
DPGGDLLRAL AKATREGNRS ISAVVHDNPE LDGMGTTVTA LLFDGGRLAM AHVGDSRAYL
YRDGILHQLT HDDTFVQSLI DDGRITQEEA SHHPQRSLLL RALNGTEVDP ALTIREVSVG
DRYLICSDGL SGVVSAEAIA EALADPDPGA AADALVQFAL AGGGPDNVTV IVADVMDTGL
GDGPTALAAP PLDPDATGPI GALPSIRMTA EMPRIPLPGI PEEAAAPAEF MPPDEDITAP
IATSGPDPDS PPARRRRRRT TLVLVAVIVV LGVAGLIGSI LWVRTQYFVG ESAGQVVVYR
GVDGSVLGFG LSSVQEGSCQ PGLNGCAPLM VEDLVPAARD QVVAGIQAGS LDDARAVIAR
LAGQMLPICP TVTEPSTTPT AAPTAIPTLT TTPTTVTPLV PGASAAPPST PANPTASPAP
SGVSTDTGTA LSTTTGTATS GTPLSTRALE PGVTCRVPK
|
|---|
| |