Gene Namu_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0056 
Symbol 
ID8445635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp65403 
End bp66557 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content69% 
IMG OID645039207 
Productmannitol-1-phosphate 5-dehydrogenase 
Protein accessionYP_003199483 
Protein GI258650327 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCCA CAGCCGTCCA TTTCGGCGCG GGCAACATCG GGCGCGGGTT CGTCGGCCTG 
ATCTTGCACC GGGCCGGGTA CGAGGTGGTC TTCGCCGACG TCGCCGAGAC CCTCATCGAT
GCCCTGCAGG TGACGCCCAG CTATCAGGTC ATCGAGGTCG GGCTCGACTC GCGGACCGAG
CGGGTCGACA ACTACCGGGC GATCAACAGC CGCAGCCACG ACGCCGAACT CGTCCGCGAG
CTCGCGGCGG CCGACATCGT CACCACCGCG GTCGGTCCCA CCGTGCTCAA ATTCGTGGCG
CCAACCATTG CCGCCGCGCT GCTCAAGCGG TCCGCCGATC AGCCCCCGCT GGCGGTGATG
GCCTGCGAGA ACGCGATCAA CGCCACCGAC GTGCTGGCCG GGCACATTCG TGAGCACTGC
TCGGACGAGG AATGGGCGGC GATCACGCCC AAGGCGGTCT TCGCCAACAC GGCGGTCGAT
CGGATCGTGC CGGCCCAGGC GGCCGACGCC GGGCTCGACG TCACCGTCGA GACCTACTTC
GAGTGGGCGA TCGAGAGCCC GCCGTTCGGA TCCAACCCGC CGGAGATCCC GGACGCGACC
TGGGTGCCCG ACCTGGCGCC CTACATCGAA CGCAAGCTGT TCACCGTCAA CACCGGTCAC
GCGACCACCG CCTATCACGG CCGGCTCCGG GGAATCAGCA AGCTCTCCGA CGCGCTGGCC
GACGAGCAGG TGCGGGCGGC GGTGGAGGGC GTGCTGGGCG AGACCAAGGC GCTGCTGGTG
GCCAAGCACG AGTTCAGCGA CGAGGCCCAG CAGGCCTACG TCGACAAGAT CCTCACCCGT
TTCGCCAACC CGCATCTGCC CGATACCACC GAGCGGGTCG GCCGGCAGCC GCTGCGCAAG
CTGTCCCGCA ACGAGCGGCT GATCGGTCCC GCGGCCGAAC TGGCCGAACG TGGCATCACC
CCGCATCACC TGCTGGCTAC CGTCGATGCG GCCCTGCAGT TCGACGTCCC GGAGGACCCG
GAGAGCGTCG AGATGCACGA GCTGCTGCGC ACGCTGAGCC CGGCGGAGGC CACCGAACGG
ATCACCGGCC TGACCCCTGA GCACCCCTTG TACGCCGAGG TGCTCGCCGT GGTCGGCAAG
CGCGTCACCG TATGA
 
Protein sequence
MSPTAVHFGA GNIGRGFVGL ILHRAGYEVV FADVAETLID ALQVTPSYQV IEVGLDSRTE 
RVDNYRAINS RSHDAELVRE LAAADIVTTA VGPTVLKFVA PTIAAALLKR SADQPPLAVM
ACENAINATD VLAGHIREHC SDEEWAAITP KAVFANTAVD RIVPAQAADA GLDVTVETYF
EWAIESPPFG SNPPEIPDAT WVPDLAPYIE RKLFTVNTGH ATTAYHGRLR GISKLSDALA
DEQVRAAVEG VLGETKALLV AKHEFSDEAQ QAYVDKILTR FANPHLPDTT ERVGRQPLRK
LSRNERLIGP AAELAERGIT PHHLLATVDA ALQFDVPEDP ESVEMHELLR TLSPAEATER
ITGLTPEHPL YAEVLAVVGK RVTV