| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_0055 |
|---|
| Symbol | |
|---|
| ID | 8445634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 64952 |
|---|
| End bp | 65389 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645039206 |
|---|
| Product | phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 |
|---|
| Protein accession | YP_003199482 |
|---|
| Protein GI | 258650326 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 92 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGACA TTCTGACCGC GTCCCAGATC AAGACCCCCG GCACCGCCAC GAACAAGGAC
GAGGCGATCC GGGAAGCCGG TCAGATCCTG GTCGATTCCG GCGCGGTCGG CCCCGAGTAC
ATCGACGCGA TGTTCGAGCG GGAGAAGTCG GTGTCCACCT ACATGGGCAA CTTCCTGGCC
ATCCCGCACG GCACCAACGA GGCCAAGGAC TCGATCAAGG CCTCCGCCCT GTCGGTGGTG
CGCTACGAGA ACCCCATCGA CTGGGACGGC AACGAGGTCC GCTTCGCCAT CGGCATCGCC
GGCTACGAGG GCGGCCACCT GGAGATCCTG GGCAAGGTCG CGATCATCTT CTCGGACATG
GACGAGGTCG ACAAACTCGT CGCCGCCGGA TCCAGCCAGG AGATCTTCGA CCTGCTCAAC
GCGGTCAACG AAGACTGA
|
|---|
| Protein sequence | MGDILTASQI KTPGTATNKD EAIREAGQIL VDSGAVGPEY IDAMFEREKS VSTYMGNFLA
IPHGTNEAKD SIKASALSVV RYENPIDWDG NEVRFAIGIA GYEGGHLEIL GKVAIIFSDM
DEVDKLVAAG SSQEIFDLLN AVNED
|
|---|
| |