Gene Namu_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0017 
Symbol 
ID8445596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp19821 
End bp21164 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content76% 
IMG OID645039168 
ProductAmidase 
Protein accessionYP_003199444 
Protein GI258650288 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC TCGTCGGCCT CGGGGCCGCC TTCCGCTCCG GTGAGCTGTC ACCGACCGAG 
CACGTCGACG ACGTGCTCGC TCGCCTGTCC GGGGACCGGT TGAACACGGT GATCACCCTG
AACGCCGACC GGGCCCGGGC CCAGGCGAGC CGGCTGGCCG ATGAGGCGGC CCAGGGGCAC
TGGCGTGGCC CGCTGCACGG AATCGCCGTC GGGGTCAAGG ATCTCATTGA CGTGCAGGGC
CTGCCGACGC GCTGCGGGTC GCACGTGCTC GACGACGCAC CGCCGGCCGA CGCCGACGCC
CCGGTGGTCG CGGCGCTGCG GGCGGCGGGT GCGATCGTCG TCGCCAAGAT GCACACCCAG
GAGTTCGCGC ACGGTCCCAC CGGCGACGCG GCCGCCACCG GGCCCGCGCA CAACCCGCAC
GATCCGACCC GGATCACCGG GGGCTCGTCG TCCGGATCGG CGGCCGCGGT GGCCGCCGGT
TACCTGCCGC TGGCGCTGGG CACCGACACC GGCTGCAGCG TCCGGACGCC GGCCGCGCTG
TGCGGCGTGG TCGGGCTCAA GCCGACGTAC GGCCGGTTGA GCACCCACGG GGTGTTCCCG
CTGGCCGAGT CCCTGGACCA CGTCGGGTTC CTGACCACCG ACGTCGCCGC GGCGCAGCTG
GCCTGGTCGG TGCTGGGCGG AACCGCGGAC GCCGGGGCCC GGATCGCCGG ACTGCGGGTC
GGCGTGCTCG TCGACGACTA CTGGCGGGCG GCCGATCCGG CCATCGACCC GTGGGCCACG
GCCGCGGTCG AGGTGCTGGC CGCGGCCGGC GCCGAACCGG TGGCGGTGCG CACCCCGATG
ATCGAGGAGC TGGTCGCGGC CTACCCGGTG ATCGTCGGCA ACGAGGCCTA CACCACGCAC
GCCGGATGGT TGGCCGAGCG AGGACAGGAC TACCAGCCGC TCATCCGCGA ACGGCTGCTC
GGCTTCGCCG ACCGGCCGGC CCGGGAGTAC ATCGGGGCGC AGCGCACGCG CCACCGGCTG
GTGGCTGCGC TGCGGGCCGC GCTCGACGGC GCCGGCGGGG GGGCCGGTGG GGGTGGGGTC
GACGTGCTGG TGCTCCCGAC CACCCGCATC CGGGCCACCC CGATCGGCGC CCCGACCACC
CGGATCGACG GGACCGACGT GCCGGTCCGG CCGGCCCTGC TCGCCCTCAA TTCCCCGTTC
AACCTGACCG GCTGGCCGGC GGTGTCGGTC CCGGCGCCGG TGGACGGGCT GCCGATCGGC
GTGCAGGTCG TCGGCGTTCG GGTGGCCGAG CGCGGCGTGC TGGACGTCGC CGCGGCCCTG
GAACGAGCCT GGCGGCCCGC CTGA
 
Protein sequence
MNDLVGLGAA FRSGELSPTE HVDDVLARLS GDRLNTVITL NADRARAQAS RLADEAAQGH 
WRGPLHGIAV GVKDLIDVQG LPTRCGSHVL DDAPPADADA PVVAALRAAG AIVVAKMHTQ
EFAHGPTGDA AATGPAHNPH DPTRITGGSS SGSAAAVAAG YLPLALGTDT GCSVRTPAAL
CGVVGLKPTY GRLSTHGVFP LAESLDHVGF LTTDVAAAQL AWSVLGGTAD AGARIAGLRV
GVLVDDYWRA ADPAIDPWAT AAVEVLAAAG AEPVAVRTPM IEELVAAYPV IVGNEAYTTH
AGWLAERGQD YQPLIRERLL GFADRPAREY IGAQRTRHRL VAALRAALDG AGGGAGGGGV
DVLVLPTTRI RATPIGAPTT RIDGTDVPVR PALLALNSPF NLTGWPAVSV PAPVDGLPIG
VQVVGVRVAE RGVLDVAAAL ERAWRPA