Gene Namu_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0013 
Symbol 
ID8445592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp15562 
End bp16848 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content71% 
IMG OID645039164 
ProductRibulose-bisphosphate carboxylase 
Protein accessionYP_003199440 
Protein GI258650284 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGCGC GCAGCAAGTT CGGGGACATG TTCAGCCTCA GCGAGACCAT CCGCGGGGCG 
GACTACCTGC TGGCCACCTA CTACCTGTCC ATGCCGGCCG AGGCGGACGT GCTGGGCAAG
GCGGCCGGGT ACGCGGTCGG CCAGACGATC GGCACCTGGA TCGAGGTGCC CGGGGTGACC
GACGAGATGC GCGACCGGCA CCGCGGCCGG GTGGTCAAGG TGCTCGAGGC CCCACCGGTC
GACCTGTCCA CCCAGGCCGA GGCTACCAGC GGCTACTTCA TCCAGATCGC CCTGCCGACG
GTCAATTTCG GCGCGTCCAT CCCGATGATG CTGGCCACCT GCATCGGCAA CGACATCTCC
ACCTCGGTCC AGGCCAAGCT GGTCGACATC GAGATCCCGG ACTCGCTGGC CCAGGAGCTG
GTCGGCCCGC GGTTCGGCAT CGAGGGCGTC CGCGAGCTCG TCGGGGTGCG GGACCGACCG
CTGGTGCTGA ACATGATCAA GCCCTGTACC GGGTTGACCC CCGAGCAGGG CGCGGCGATC
TTCTACGACA CCGCCCTGGG CGGGGTCGAC CTGATCAAGG ACGACGAGCT GCTGGGCAAC
CCGCCGTTCT CGCCGGTGGT CGACCGGGTC AAGGCCTACC TGGCCGCCGC CGACCGGGCC
CGCGACGTCA CCGGCCGCGA CGTGGTCTAC ATCCCCAACG TCACCGATCG GCCCGACCGG
ATGCTCGACA CCGCCCGGCG GGCCGTCGAT GCCGGCGCCC GGGCCGTGAT GATCGCCTAC
GCGAGTGCGG GTTTCGGCTC CCTGCAGAGC TTGGCCGAGT CGATCGGGGT GCCCATCCTG
GCCCACTACG CCGGGGTGAC CCCGTATTTC GAGGGCCCGG GCACCGGCCT GTCCGCGCCG
ATCGCCCTGG GCATGCTGCC GCGGCTGGCC GGCGGCGACA TGGTGCTGAC CATCACCCCC
TACGGCGGCT ACCCGCTGCG CCGGTTGCAG TACCTGAAGA TGGTCCAGCA GCTGCAGCTG
AGCCGACCGC ACATCGCGCC GGCCTTCCCG GTGGTCGGCG GTGGCGTGCA CCCGGGGACC
GTGCAGACCT ACGTCGACGA GTTGGGCCCG GACATCATCC TGGGTGCCGG CGGGGCGATC
CAGGGGCATC CGGATGGCGC GGCGGCCGGG GCCGACGCCA TGCGCCAGGC GATCGACGCG
GTGATGGCCG GACGATCGGT CGTGGAGGCC GGGCAGGAAC ACCCGGCGCT GGGTCGCGCC
CTGGACCGGT TCGGCACCAC CGTCTGA
 
Protein sequence
MPARSKFGDM FSLSETIRGA DYLLATYYLS MPAEADVLGK AAGYAVGQTI GTWIEVPGVT 
DEMRDRHRGR VVKVLEAPPV DLSTQAEATS GYFIQIALPT VNFGASIPMM LATCIGNDIS
TSVQAKLVDI EIPDSLAQEL VGPRFGIEGV RELVGVRDRP LVLNMIKPCT GLTPEQGAAI
FYDTALGGVD LIKDDELLGN PPFSPVVDRV KAYLAAADRA RDVTGRDVVY IPNVTDRPDR
MLDTARRAVD AGARAVMIAY ASAGFGSLQS LAESIGVPIL AHYAGVTPYF EGPGTGLSAP
IALGMLPRLA GGDMVLTITP YGGYPLRRLQ YLKMVQQLQL SRPHIAPAFP VVGGGVHPGT
VQTYVDELGP DIILGAGGAI QGHPDGAAAG ADAMRQAIDA VMAGRSVVEA GQEHPALGRA
LDRFGTTV