Gene Namu_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0012 
Symbol 
ID8445591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp14767 
End bp15525 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content74% 
IMG OID645039163 
Producttriosephosphate isomerase 
Protein accessionYP_003199439 
Protein GI258650283 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGC TGCTCATCGG CTCCAGCCTG AAGATGTACT TCGGGCACCG GCAAACCCTG 
GACTGGGTCC GGGCCGTCGC GGCGATCTGC ACCGAGCATC CCGCGACCGT GAGCGGGGCC
GTCGAGTTCT TCGTCATCCC GACGTTCCCC AGCATCCCGG CCGTGGTCGA GATCGCCCGG
CCGGCCGGGA TCGCGGTCGG GGCCCAGGAT CTGCACTGGG CCGACTCCGG ACCGTTCACC
GGCGAGGTCA GCGCGGCCGA GCTGGCCGAG CTCGGCTGCA CGCTGGCCGA GGTGGGGCAC
GCCGAACGCC GGTCGCTGTT CGGTGAGACC GACGAGATGG TGGCCGGCAA GACCCATGCG
GCGCTGCGGC ACGGGCTGGC GCCGGTGGAA TGCGTCGGCG AGCCCGACCA GGGGCCGGCC
GAGCTCGCCG TCCAGGTGTG CCTGGATCAG CTGGAACGGG CCCTGGCCCC GGCGCGGGCG
GCCGGCACCG GCGGCCGGCT GATCGTGGCC TACGAGCCGG TCTGGGCCAT CGGCGCGCCG
ACCCCGGCCC CGCCGGAGCA CGTTCGGGCG GTCTGCGGCG CGCTGCGCGA GCATCTGCGG
GCCGACCCGC TGTTCCCGGA CGCCGCGGTG ATCTACGGCG GCAGCGCCGG ACCCGGTCTG
TTGCCCACCA TCGTCGACGC GGTCGACGGG ATGTTCCTGG GCCGGTTCGC GCACGATCCA
CAGGCCGTGC GGGCCGTGCT GGACGAAGTC GAACGCTGA
 
Protein sequence
MARLLIGSSL KMYFGHRQTL DWVRAVAAIC TEHPATVSGA VEFFVIPTFP SIPAVVEIAR 
PAGIAVGAQD LHWADSGPFT GEVSAAELAE LGCTLAEVGH AERRSLFGET DEMVAGKTHA
ALRHGLAPVE CVGEPDQGPA ELAVQVCLDQ LERALAPARA AGTGGRLIVA YEPVWAIGAP
TPAPPEHVRA VCGALREHLR ADPLFPDAAV IYGGSAGPGL LPTIVDAVDG MFLGRFAHDP
QAVRAVLDEV ER