Gene Namu_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0008 
Symbol 
ID8445585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp10015 
End bp12510 
Gene Length2496 bp 
Protein Length831 aa 
Translation table11 
GC content67% 
IMG OID645039157 
ProductDNA gyrase subunit A 
Protein accessionYP_003199435 
Protein GI258650279 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGGAC CCAACAGCGG CGAACACGAT CGCACCGAGC CGGTCGATAT CCAGCAGGAG 
ATGCAGCGCT CGTTCATCGA CTACGCGATG AGCGTGATCG TCTCCCGCGC GCTGCCCGAC
GTGCGGGACG GGCTCAAGCC CGTGCACCGT CGGGTGCTCT ACGGGATGTA CGACTCGGGT
TTCCGGCCGG ACCGCTCGAC GGTGAAGTCC TCCCGGGTGG TCGGCGACGT GATGGGTAAC
TATCACCCGC ACGGTGACTC CCCGATTTAC GACACCGTTG TCCGGATGGC CCAGCCGTGG
TCGCTGCGCT ACCCGATGAT CGACGGGCAG GGCAATTTCG GGTCGATGGG CAATGACCCG
CCCGCGGCCA TGCGGTACAC CGAATGCCGG CTGACCCAGC TGGCGATGCT GATGCTCGAC
GGCATCGGTG AGAAGACCGT CGACATGGTG CCCAACTACG ACAACAAGAC CGTCGAGCCG
ACGGTCCTGC CGGCGCGCAT CCCCAACCTG CTGGTCAACG GCTCGTCCGG GATCGCGGTC
GGCATGGCCA CCAACATCCC GCCGCACAAC CTGCGCGAGG TGGCCTCGGC CGTCGTCTGG
TTCCTGGAGA ACCCCGAGGC CAGCCCCGAG GAGCTGCTCG AAGCGTCGAT GGAGCGGATC
CAGGGGCCGG ACTTCCCGAC CGGCGCCCTG ATCGTCGGCA AGGACGGCAT CGCGGATGCC
TATCGCACCG GCCGCGGCTC CATCCGGATG CGGGCCGTGG TGAACATCGA GGAGGACGCC
AAGGGGCGCA CCATCCTGGT GGTCACCGAA CTGCCCTATC AGGTGAACCC GGACAACCTG
GTCGAGGCGA TCGCCGGCCT GCACAAGGAC GGCAAGATCG CCGGCATCGC CGACATCGCC
GACGAGTCGT CCGACCGGAT CGGCATGCGG CTGGTCATCA CCCTCAAGCG GGACGCGGTG
GCCAAGGTCG TGCTGGCCAA CCTGTTCAAG CACACCGCGC TGCAGACCTC GTTCGGCGCA
AACATGCTGG CCATCGTCGA CGGGGTGCCC CGCACCCTGC GGCTGGATCA GATGATCAGC
CTGTACGTGG CCCATCAGGT CGAGGTCATC GTCCGCCGGA CGCAGTACCG CTTGGACAAG
GCCGAGGAAC GGGCCCACAT CCTGCGCGGC CTGGTCAAGG CCCTGGACAT GCTCGACGAG
GTCATCGCCC TGATCCGTCG CTCGCCCTCG GCCGAGGAGT CCAAGGCCGG CCTGATGGAG
TTGCTGGACG TCGACGAGAT CCAGGCCACC GCCATCCTGG ACATGCAGCT GCGCCGGCTG
GCCGCCTTGG AGCGGCAGCG GATCATCGAC GAGTTGGCCG AGCTGGAGCG GGTCATCGCC
GACCTCAAGG ACATCCTGGC CAAACCCGAG CGGCAGCGGG CGATCATCCG TGACGAGCTG
ACCGAGGCTG TGGACAAGCA CGGCGACGAC CGGCGCACCC GGCTGGTGCC CTACGACGGT
GACGTCTCCG TCGAGGACCT GATCGCGGTC GAGGACGTGG TGGTCACCAT CACCCGGACC
GGTTACGCCA AGCGGACCAA GACCGATCTG TACCGGGCCC AGCGGCGCGG CGGCAAGGGC
GTGCAGGGCG CGGCGCTCAA GCAGGACGAC ATCGTCGCCC ACTTCTTCGT CTGCTCCACC
CACGACTGGA TCCTGTTCTT CACCAACAAG GGGCGGGTCT ACCGGGCCAA GGCCTACGAG
CTGCCGGAGG CGAACCGCAA CGCGCGCGGC CAGCACGTGG CCAACCTGCT GGCCTTCCAG
CCGGACGAGC GGATCGCCGA GGTCATCCAG ATCCCGCACT ACCAGGCCGC GCCGTACCTG
GTCCTGGCGA CCAAGGGCGG GCTGGTCAAG AAGAGCGAGC TGGCCGCGTT CGACTCCAAC
CGGGCCGGCG GGATCGTGGC AGTCAACCTC CGCGACGACG ACGAGCTGGT CGGAGCGGTG
CTCTGCGACG CGAATGCCGA TCTGCTGCTC ATCTCGGCCG AGGGTCAGTC CATCCGGTTC
CACGCCACCG ACGAGACGCT GCGACCGATG GGTCGGGCCA CCTCGGGCGT GCTGGGGATG
CGATTCAACG CCGGCGATGA ACTTCTGTCG ATGTCAGTCG TCTATGAAGG GGCGCAGGTG
CTGGTCGCGA CCGAACGCGG CTACGCCAAG CGCACCGATA TCGACGAATA CCCGGTCCAG
GGCCGCGGCG GAAAGGGCGT CTTGACAATT CAATACGACC GCCGTCGTGG CAAGCTGGTG
GGCGCCCTGA TCGTCGATCT GGATACCGAG GTGTACGCCA TCACCTCCGG CGCCGGGGTC
ATCCGGACGC AGGCGCGCGA GGTGCGCAAG GCGAAACGAC AGACCATGGG AGTGCGCTTG
ATGAACCTGT CCGAGGGGGA CAGCCTGGTG GCCATCGCCC GGAACGCCGA CGACGCCGAC
ACCGTCGACA GCGGCCCGGC CGGGGGTTCG TCGTGA
 
Protein sequence
MTGPNSGEHD RTEPVDIQQE MQRSFIDYAM SVIVSRALPD VRDGLKPVHR RVLYGMYDSG 
FRPDRSTVKS SRVVGDVMGN YHPHGDSPIY DTVVRMAQPW SLRYPMIDGQ GNFGSMGNDP
PAAMRYTECR LTQLAMLMLD GIGEKTVDMV PNYDNKTVEP TVLPARIPNL LVNGSSGIAV
GMATNIPPHN LREVASAVVW FLENPEASPE ELLEASMERI QGPDFPTGAL IVGKDGIADA
YRTGRGSIRM RAVVNIEEDA KGRTILVVTE LPYQVNPDNL VEAIAGLHKD GKIAGIADIA
DESSDRIGMR LVITLKRDAV AKVVLANLFK HTALQTSFGA NMLAIVDGVP RTLRLDQMIS
LYVAHQVEVI VRRTQYRLDK AEERAHILRG LVKALDMLDE VIALIRRSPS AEESKAGLME
LLDVDEIQAT AILDMQLRRL AALERQRIID ELAELERVIA DLKDILAKPE RQRAIIRDEL
TEAVDKHGDD RRTRLVPYDG DVSVEDLIAV EDVVVTITRT GYAKRTKTDL YRAQRRGGKG
VQGAALKQDD IVAHFFVCST HDWILFFTNK GRVYRAKAYE LPEANRNARG QHVANLLAFQ
PDERIAEVIQ IPHYQAAPYL VLATKGGLVK KSELAAFDSN RAGGIVAVNL RDDDELVGAV
LCDANADLLL ISAEGQSIRF HATDETLRPM GRATSGVLGM RFNAGDELLS MSVVYEGAQV
LVATERGYAK RTDIDEYPVQ GRGGKGVLTI QYDRRRGKLV GALIVDLDTE VYAITSGAGV
IRTQAREVRK AKRQTMGVRL MNLSEGDSLV AIARNADDAD TVDSGPAGGS S