Gene Namu_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_0003 
Symbol 
ID8445580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3747 
End bp4652 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID645039152 
Product6-phosphogluconate dehydrogenase, decarboxylating 
Protein accessionYP_003199430 
Protein GI258650274 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones91 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCG GTCTCATCGG TCTTGGCAAG ATGGGCGCCA ACATGGCCGA ACGGCTTCGC 
CGGGATGGTC ATCAGGTGGT CGGATTCGAT CGCAGCCCGC AGGCCCCGCG GGACGTCGAC
TCGCTCGAGG GCCTGGTCGC GGCGCTGACC ACGACCCCGC GGGTGGTGTG GGTGATGGTG
CCCTCCGGTG AGCCGACCCG GGCCACCGTC GCCGCCCTCG GTGAGCTGCT CTCGCCGGGG
GACATCATCA TCGACGGCGG CAACTCCGAG TACGTCGACG ACAAGGCCCA TGCCGCCGCG
CTCGCGCCCA AGGGAATCCG GTACCTGGAC TGCGGCGTCT CCGGCGGGGT CTGGGGCATC
ACCGAGGGCT ACGCCCTGAT GGTCGGCGGC GACGCCGACG CGGTGGCCGT CGCGCAGCCC
ATCTTCGACT CGCTCAAGCC GCCGACCGGG GGCTTCGTGC ATGCCGGACC GGTCGGGTCC
GGGCACTTCG TCAAGATGAT CCACAACGGG ATCGAGTACG GGATCATGCA GGCCTACGGC
GAGGGCTACG AGCTGATGAA GGCGGTCGAC TGGGTGACCA ACCCGGACGA GGTGATGGCC
TCCTGGCAGA ACGGCACGGT CATCCGGTCC TGGCTGCTGG ACCTGCTGGT CCGGGCCTTG
GACGCGGACC CGGGGCTGAG CCAGATCCGC GGCTACGCCC AGGACTCCGG CGAGGGCCGG
TGGACCATCG AGGCGGCGAT CGAGAACGCG GTGCCGATGC CGGTGATCAC CGCCGCGCTG
TTCGCCCGCT TCGCCTCGCG GCAGACGGAC TCGCCGACGA TGAAGGTGGT CGCCGCGCTG
CGCAACCAGT TCGGTGGGCA TCCGGTCGGC ACCGAGGGTT CCGACGCCTC GGTCCCGATC
GCCTGA
 
Protein sequence
MQLGLIGLGK MGANMAERLR RDGHQVVGFD RSPQAPRDVD SLEGLVAALT TTPRVVWVMV 
PSGEPTRATV AALGELLSPG DIIIDGGNSE YVDDKAHAAA LAPKGIRYLD CGVSGGVWGI
TEGYALMVGG DADAVAVAQP IFDSLKPPTG GFVHAGPVGS GHFVKMIHNG IEYGIMQAYG
EGYELMKAVD WVTNPDEVMA SWQNGTVIRS WLLDLLVRAL DADPGLSQIR GYAQDSGEGR
WTIEAAIENA VPMPVITAAL FARFASRQTD SPTMKVVAAL RNQFGGHPVG TEGSDASVPI
A