Gene Dret_2535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2535 
Symbol 
ID8420414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013224 
Strand
Start bp27776 
End bp28258 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content48% 
IMG OID645039133 
Productputative transposase 
Protein accessionYP_003199390 
Protein GI258406649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.00000152425 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones119 
Fosmid unclonability p-value0.735712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCTC ATCTTCCCAA GCAAATGAAA GAAGCAGCGG TGCATCAAGC GTTGACGGGA 
CACAGCACCA CAAAGCAAAT TGCAAAGGAG TACGGAGTCG GGCTTTCCTC TCTAAATCGC
TGGATCAAAA ATGCAAAAAA CTCAGGAGCC CCTGGCATGG CCCAGAAAGA AAAACGCCCC
AAAGATTGGA CCAGGGAAGA GCGACTCAAT GCCCTTCTCG AAGCGGCTAA GCTCTCTGAT
GAAGAACTTG GGGCGTGGTG TAGGCAAAAA GGACTACACA CCCACCATCT GGAAAAATGG
CGCAAAGAAC TTGCCCAAGA ACAACCTAGC GCCGAAAAGA CAACATCCAA ACAACTGAAA
AAAGAGATCA AAGAACTCAA AAGCGAATTA AATCGAAAAG ATAAGGCCCT TGCTGAAACC
AGCGCCTTGT TGGTGCTGAA AAAAAAAGCC GATGCAATCT GGGGGGACAA AGAGGACGAT
TGA
 
Protein sequence
MPPHLPKQMK EAAVHQALTG HSTTKQIAKE YGVGLSSLNR WIKNAKNSGA PGMAQKEKRP 
KDWTREERLN ALLEAAKLSD EELGAWCRQK GLHTHHLEKW RKELAQEQPS AEKTTSKQLK
KEIKELKSEL NRKDKALAET SALLVLKKKA DAIWGDKEDD