Gene Dret_2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2523 
Symbol 
ID8420384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013224 
Strand
Start bp16873 
End bp17844 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content41% 
IMG OID645039124 
Producthypothetical protein 
Protein accessionYP_003199381 
Protein GI258406640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.000860556 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones121 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTAA CTCCGAGTGA CAACATCCAT GCGCTACAGA TTCAAGCAGG CGCACTAGGA 
AGAAAAACTG GGCACGCTTT CGAAGATAAA ATCACTGAAG AGCTGAATGG ACTTTGTTGC
CCTATAAAGG TTCAGGAGCT TAACACGCAT GTGTTGGTTG GAGATCCTGC TTTATTGTTA
CTTCGCTATA TTGCTAAAAA AGAAGGGCTG GGCGAAATTC AAACCATTTC TTCACTATCG
ACAGGTGCAT TAGCCACATC AGAGGATGGG AAGAGATTCT TAAGTATAGA AAATAAAAGC
ATATCTAGAT GTAAAAGTGA TCTGATAATT ACGATTGAGG ATCCCAATAC TAGAATTACG
GTTGGGGTAT CAACAAAGCA ATGTAATAAA AAAACTCCAA CCAATGCACA GCTCTATTTT
ACAACCGCCG TAGGTTTCTC TCGCCTTCTA ATGAATAATG GCATTTCTGT GTCTGATACG
GCCATTAACG CGCTAAGACA GTTTTGTGGC GACCCGGGAT TTCGGCCACT TGACGATCCC
ACCAAACTGG AAAATAGGCT ATTCGACACC CGGCGTTTTT TTTGGGAAGA AATAGATAAA
AACGGGAGGG AAGAATGGGA GGCCATTTTT TCCCAAAACC AAAACGATGT ATCGCGATTG
CTTTTTCAAA AAGCATATTT GGACGACCCT TTTTCACCCG AATATCTTTT ACACAAAACG
AAAGCATCTG ATGGTTGGCA TAATACAGAG GTCGCAATAT ATAGTATTAA TGAGATTATT
TCTTTGAGTA AAAGATACCA AGGGTTCTAT ACGAAAAAAT ACTCCGTCAA GAAAGGAAGA
TACAAAGATC CGGTTGGTGT GCAGCACCTT GCGCCTAGAT TTGGAATTAT CCAAATGCAG
CGGGGTGGGC AAAAACAACA TCCAACACAG TTACAGTTTA ATCTAGAGGC TGGGTACTTC
TACAAAATTT AG
 
Protein sequence
MALTPSDNIH ALQIQAGALG RKTGHAFEDK ITEELNGLCC PIKVQELNTH VLVGDPALLL 
LRYIAKKEGL GEIQTISSLS TGALATSEDG KRFLSIENKS ISRCKSDLII TIEDPNTRIT
VGVSTKQCNK KTPTNAQLYF TTAVGFSRLL MNNGISVSDT AINALRQFCG DPGFRPLDDP
TKLENRLFDT RRFFWEEIDK NGREEWEAIF SQNQNDVSRL LFQKAYLDDP FSPEYLLHKT
KASDGWHNTE VAIYSINEII SLSKRYQGFY TKKYSVKKGR YKDPVGVQHL APRFGIIQMQ
RGGQKQHPTQ LQFNLEAGYF YKI