Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2523 |
Symbol | |
ID | 8420384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013224 |
Strand | - |
Start bp | 16873 |
End bp | 17844 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645039124 |
Product | hypothetical protein |
Protein accession | YP_003199381 |
Protein GI | 258406640 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.000860556 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 121 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTAA CTCCGAGTGA CAACATCCAT GCGCTACAGA TTCAAGCAGG CGCACTAGGA AGAAAAACTG GGCACGCTTT CGAAGATAAA ATCACTGAAG AGCTGAATGG ACTTTGTTGC CCTATAAAGG TTCAGGAGCT TAACACGCAT GTGTTGGTTG GAGATCCTGC TTTATTGTTA CTTCGCTATA TTGCTAAAAA AGAAGGGCTG GGCGAAATTC AAACCATTTC TTCACTATCG ACAGGTGCAT TAGCCACATC AGAGGATGGG AAGAGATTCT TAAGTATAGA AAATAAAAGC ATATCTAGAT GTAAAAGTGA TCTGATAATT ACGATTGAGG ATCCCAATAC TAGAATTACG GTTGGGGTAT CAACAAAGCA ATGTAATAAA AAAACTCCAA CCAATGCACA GCTCTATTTT ACAACCGCCG TAGGTTTCTC TCGCCTTCTA ATGAATAATG GCATTTCTGT GTCTGATACG GCCATTAACG CGCTAAGACA GTTTTGTGGC GACCCGGGAT TTCGGCCACT TGACGATCCC ACCAAACTGG AAAATAGGCT ATTCGACACC CGGCGTTTTT TTTGGGAAGA AATAGATAAA AACGGGAGGG AAGAATGGGA GGCCATTTTT TCCCAAAACC AAAACGATGT ATCGCGATTG CTTTTTCAAA AAGCATATTT GGACGACCCT TTTTCACCCG AATATCTTTT ACACAAAACG AAAGCATCTG ATGGTTGGCA TAATACAGAG GTCGCAATAT ATAGTATTAA TGAGATTATT TCTTTGAGTA AAAGATACCA AGGGTTCTAT ACGAAAAAAT ACTCCGTCAA GAAAGGAAGA TACAAAGATC CGGTTGGTGT GCAGCACCTT GCGCCTAGAT TTGGAATTAT CCAAATGCAG CGGGGTGGGC AAAAACAACA TCCAACACAG TTACAGTTTA ATCTAGAGGC TGGGTACTTC TACAAAATTT AG
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Protein sequence | MALTPSDNIH ALQIQAGALG RKTGHAFEDK ITEELNGLCC PIKVQELNTH VLVGDPALLL LRYIAKKEGL GEIQTISSLS TGALATSEDG KRFLSIENKS ISRCKSDLII TIEDPNTRIT VGVSTKQCNK KTPTNAQLYF TTAVGFSRLL MNNGISVSDT AINALRQFCG DPGFRPLDDP TKLENRLFDT RRFFWEEIDK NGREEWEAIF SQNQNDVSRL LFQKAYLDDP FSPEYLLHKT KASDGWHNTE VAIYSINEII SLSKRYQGFY TKKYSVKKGR YKDPVGVQHL APRFGIIQMQ RGGQKQHPTQ LQFNLEAGYF YKI
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