Gene Dret_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2521 
Symbol 
ID8420382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013224 
Strand
Start bp14311 
End bp15426 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content51% 
IMG OID645039122 
Producthypothetical protein 
Protein accessionYP_003199379 
Protein GI258406638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones123 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTCCAA AATCTGTTGA CCGGTACAAT TCACCTTATT ATAAATGCAA AAATTGCGAT 
AAATTTTATG AACCGTACGT CTCTGCGTTG AACCTTCGAA AGGGGAAGTA CCAATACGAC
GTCCAAAAAA TTGTCGCCAA AGTGGCCTCG TCGGTGCCTT TCGATGAAAC AGCGGAAATC
TTGTACGATA CGCATGGCCT TTCCCTCTCC CAGGCCACAG TACATGAGTT GACCAATGAA
CTAGCCGCCC ATGCTCGACT TGAAGAGATT AGCCCAGAAG CAGCAACCAT CCATGAGATT
ATCGAACAGG CTACCCGCCC CAATAAAGCC AAGCCGGTGC TCGTTTTTGC CGCAGATGGA
GCCATGTCCC CAACTCGAAC AGAAAAAGGC AAGCCCAATG CGTGGAAAGA GGCCAAAGGT
ATACGGGTCT ACTTGCTTGA TGGGCAGCAT TTAGCCCAAG TGCTGAGTTG GCATCAGATA
TGCGACAAAC ACCGCTTCAA ATCCTTTTTG CAGCAGATTA AACAGCAAAA CCTTTTCCCG
GAAGACAAAG TTCGGATCTG CTGTATAGGC GACGGAGCCG GGTGGATATG GGAGGCGATG
GAAGAGGCTT TTCCAGACGC ACGGCAAATT TTGGATTATT ACCATTGCCA AGAACATATC
CACGAATTTG CCAACGCCCG CTTTGCTGAC AAGGCAGCCC GGGACAAGTG GCTGCGTGAA
ACGACAAATC GGCTCTTTCA AAATAAACTG AGCAGTGTTC TCGCTGGATT GAGGCGAATG
AAGCTCACCG GCGAGGCAGC AGAGAAGCGA GACGCTCTGT GCTCGTATTT GTCAAAGAAC
AAGGACCGCA TGGATTACGG GAAAGCCAAG CGGGGCGGCT ATCCTCTGGG CAGCGGGGCC
ATAGAAAGCG CTAACAAATT TATAAGCCAC ATACGGCTCA AACGCTCAGG AGCCTGGTGG
AAAGTCGACC TGGCTAACAA TATCCTGGCC TTGCGCTGTT CGAGGTACAA CAAATCCTTC
GATCGCTTCT TTGCCGCCTA TGAAAAAAGC CAGCGGCAGG ACTTAGGGTC GGCTCAGTCC
CACTTATCGC TTTGTCAAGG GGGCCGTCGC AAGTAG
 
Protein sequence
MCPKSVDRYN SPYYKCKNCD KFYEPYVSAL NLRKGKYQYD VQKIVAKVAS SVPFDETAEI 
LYDTHGLSLS QATVHELTNE LAAHARLEEI SPEAATIHEI IEQATRPNKA KPVLVFAADG
AMSPTRTEKG KPNAWKEAKG IRVYLLDGQH LAQVLSWHQI CDKHRFKSFL QQIKQQNLFP
EDKVRICCIG DGAGWIWEAM EEAFPDARQI LDYYHCQEHI HEFANARFAD KAARDKWLRE
TTNRLFQNKL SSVLAGLRRM KLTGEAAEKR DALCSYLSKN KDRMDYGKAK RGGYPLGSGA
IESANKFISH IRLKRSGAWW KVDLANNILA LRCSRYNKSF DRFFAAYEKS QRQDLGSAQS
HLSLCQGGRR K