| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2515 |
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| Symbol | |
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| ID | 8420376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013224 |
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| Strand | + |
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| Start bp | 10786 |
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| End bp | 11451 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645039116 |
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| Product | nuclease (SNase domain protein) |
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| Protein accession | YP_003199373 |
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| Protein GI | 258406632 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 71 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 120 |
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| Fosmid unclonability p-value | 0.893874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGCT TTACGGCTAA TGCCCGGATT GCCTTGGCAA GATATGTCCT TGTCTGGATT
ATTGTTCTTC TCTCCCCGGG CCTGGTTTTT TCCTGGACAG GTAAGGCGGT CCATATCAAA
GACGGCGATA CGATCGTGGT CTTACGAGAC CATTCTGAGG TCGACGTGCG CCTGTATGGT
ATCGATTGTC CGGAAAAGCG TCAGGATTTT GGAACCAGAG CCAAGCGGTT TACTGCTAAG
ATGGTCGGTA TGCAGCGCGT GGAAGTCCAA GAAATGGATG TTGACCGCTA CGGTCGCGTG
GTCGGCCTTG TCGCCTTGGC CGGTTCAGGG GAAAGTCTAA ATGCGGCATT GCTCTATAAT
GGCCTAGCCT GGGTTTATCA CAAGTATTGC GGACAAGATT TTTGTGGCCG CTGGATCACC
TTGGAACGAA AGGCGAAGCT CGCCAAACGG GGGATGTGGG GGCAACCAAA TCCGATCCCC
CCTTGGGAAT GGCGGCATGG TGGCCGCTCT GGCAGCCAGA GTAGAAGCGA GGCTGGTGGC
GACAAGGATT GTAGCGATTT TTCGACCCAA GGCCAGGCGC AGCGGTTCTT TGAGGCCCAT
CAACCCGGCG ACCCCCATCG CTTGGACGGA GATGGGGATG GGCAGGTGTG CGAAGGGCTG
CCATAA
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| Protein sequence | MRRFTANARI ALARYVLVWI IVLLSPGLVF SWTGKAVHIK DGDTIVVLRD HSEVDVRLYG
IDCPEKRQDF GTRAKRFTAK MVGMQRVEVQ EMDVDRYGRV VGLVALAGSG ESLNAALLYN
GLAWVYHKYC GQDFCGRWIT LERKAKLAKR GMWGQPNPIP PWEWRHGGRS GSQSRSEAGG
DKDCSDFSTQ GQAQRFFEAH QPGDPHRLDG DGDGQVCEGL P
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