| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2465 |
|---|
| Symbol | |
|---|
| ID | 8420327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2826489 |
|---|
| End bp | 2826809 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645039068 |
|---|
| Product | regulatory protein, FmdB family |
|---|
| Protein accession | YP_003199325 |
|---|
| Protein GI | 258406583 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0532528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00128388 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCT ATGAATATTG TTGCGAGGAC TGTCAGCAAG TCTTTGAGGA ATGGCAAAAG
GATTTTGAAG AGCGGCAGAT GCCGTGCCCT GTTTGCGGAG GGAATTCGAA GCGATTGATT
TCGAACACCT CTTTTATCCT CAAGGGCGGT GGATGGTATG TCACGGACTA CGGTCAGGGG
ACAGCCAGCG CCAACGGCAA CGGGAGCAAG CCGAGCGAAT CCACGAGCGA CTCCAGCACG
GCGTCCACTG AGACATCGTC CAGTTCGAAT ACCTCGTCGG GAACGAGTTC GTCATCCGCG
CCCGAATCCA GTTCTTCGTA A
|
|---|
| Protein sequence | MPIYEYCCED CQQVFEEWQK DFEERQMPCP VCGGNSKRLI SNTSFILKGG GWYVTDYGQG
TASANGNGSK PSESTSDSST ASTETSSSSN TSSGTSSSSA PESSSS
|
|---|
| |