| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2426 |
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| Symbol | |
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| ID | 8420286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2777837 |
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| End bp | 2778934 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645039027 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003199286 |
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| Protein GI | 258406544 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.54628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000883837 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCGG CCAGATACCG GGGCCCAGCG GCACTGCTTT TTATCCTCGG CCTGATGCTC
GGAGGATGCT CTGAAACTCC TGTCGGGGCC GCCGGCAATG CGAACGCTAC CGCGCCTCAG
GCGGTGGTCG TCGAAGAAAC CCCGGTCTGG ACCAACGCTT CCAGGCGCAG CTTTGCTGGC
ACGGCCCAGG CCGGGGTGCA AACTCCACTG AGCTTTCGTG TCGAAGGGGA GATCACTCGC
TTGCCGGTCA GCGCCGGCCA GAGAGTCCAG GCCGGATCTG TGGTCGCTGT GTTGGACGCA
ACAGATTACC GGCTGCAGCG TCAGCAGCGA AGCGCGGATC TCGCCCAGGC CAAGGCTGGC
CTGGACCAGG CCCGGGCATC CTATTTCCGG GTCCGTTCCC TGTACGAGGC CGGAAATGTT
AGCACCCAGG AGTTGGACGA CGCCAAAGCG GCCTTCGAAA CGGCCCAGGC CCAGCTCCAG
AAGGCTGAAA AGGCGGTGGC ATTCGCCCAA AAGCGGGTTG GCTATTGCCG TCTGGAGGCC
CCGATTGCGG CCGAAGTCGT GCGTATCCCG GTCGAGATCC ACCAGAATGT GGCTGCAGGC
CACCCCGTCG TCGTTCTTGC CAGTCAGGGG CCGCTGGAGG TCGAACTTGG CGTGCCCGAG
TCCTTTCTTT CCCGGCTGCA TCGCGGGGAC AAGGCCAACG TCCGCTTCGA CGCCCAGCCT
GAATCGGTGT ACTCGGCTAC GGTGACAGAA GTCGGCATCC AGGCCGGGCC GACAACCGCT
TTTCCGGTCA CCGTCCGTTT GGACCAGCCC GCCCCTGGCC TGCGCTCCGG AATGGCCGCC
AGCGTCACCT TCGTCGCCGC CTTGAAACGC CCATACATCG CTGTTCCCCC GCAGGCAGTC
CGGGGACAGG AAAACCAGCC TACGATCTTT GTCTACCACC GCGATACAGG GCAGGTGGAA
GAACGACCGG TGGTCACAGG AGAACTCGTG GCAGCAGGCC TCCAGATCTT CAAAGGAGTG
TCGCCCGGTG AAACGATCGT CACGCGTGGC GTGCACCGTC TTCGCGACGG CGTTGCGGTC
CGCCCCCTCT CTCAATAA
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| Protein sequence | MNAARYRGPA ALLFILGLML GGCSETPVGA AGNANATAPQ AVVVEETPVW TNASRRSFAG
TAQAGVQTPL SFRVEGEITR LPVSAGQRVQ AGSVVAVLDA TDYRLQRQQR SADLAQAKAG
LDQARASYFR VRSLYEAGNV STQELDDAKA AFETAQAQLQ KAEKAVAFAQ KRVGYCRLEA
PIAAEVVRIP VEIHQNVAAG HPVVVLASQG PLEVELGVPE SFLSRLHRGD KANVRFDAQP
ESVYSATVTE VGIQAGPTTA FPVTVRLDQP APGLRSGMAA SVTFVAALKR PYIAVPPQAV
RGQENQPTIF VYHRDTGQVE ERPVVTGELV AAGLQIFKGV SPGETIVTRG VHRLRDGVAV
RPLSQ
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