| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2402 |
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| Symbol | |
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| ID | 8420262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2747212 |
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| End bp | 2750295 |
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| Gene Length | 3084 bp |
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| Protein Length | 1027 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645039003 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003199262 |
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| Protein GI | 258406520 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1379] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGA CACAATTGTA TTACGCGGAC CTGCACATCC ATTCCAAATA TTCCCGGGCG
ACCAGCAGAC AACTCACCCC GCGCCATCTC GCCGCCTGGG GCTGGGTCAA AGGGATCGAC
CTCCTGGCCA CCGGGGATTT CACGCACCCG GCCTGGTTGG CCTTGCTCCA GGAACAACTC
GAGGAGGACG GCCGCGGCCT GTTACGTCTC AAAGAGCCAA CTCGCCTGGA ACAGGAACTG
CCCTGGCTGG AAACTCCGGT ACCGAAAGCG CCGCGGTTCA TGCTCGGTAC GGAGATCAGC
TCCATCTACA AGCGCGGCGG CGTGGTGCGC AAAGTCCACA ACCTGGTCTA TCTCCCGAAC
TTCGACGCCG TCCGCCGCTT CAACGAACGC CTGGACCAGG TCGGCAATCT TGAGGCCGAT
GGCCGCCCCA TCCTGGGCCT CGATTCAGAG CACCTTTTGG AAATGGTCCT GGAGACCGAT
CCCCTCGGTT TCGTCATCCC CGCCCATATC TGGACGCCCT GGTTTTCCCT GTTCGGCTCC
AAATCCGGCT TCAACGCTCT TGAGGAGTGT TTCGGGAGCC TTTCCCAGCA TATCTTTGCC
GCCGAAACCG GGTTGTCCTC GGACCCGGCC ATGAATTGGC ACTGGTCCGC CCTGGACCAC
CTGACCCTGG TCTCCAATTC CGACGCCCAT TCCGGGGCCA ACCTCGCCCG GGAGGCGACC
CTGTTCAGCG GCACCATGGA TTTCGCCACG ATTCGCGAAG GACTGCGCGA CCGCAGTACA
GGGACGTTTC AGGGCACCTT GGAGTTTTTC CCCGAAGAAG GGAAATACCA CCACGACGGC
CACCGTAAAT GCGGCCTCTC CTGGGACCCG CGGCAGACCG AGGACCACGG CGGTATCTGT
CCGGTCTGCG GACGTCCGGT GACAGTCGGG GTATTGAACC GCATCCTGGA ACTGGCCGAC
CGCAAAGAGC CCCTCCGGCC TCCGGACCAC CCCGATTTTG TCTCCCTGGT CCCCCTTCCG
GAACTGCTCT CGGAACTGCT GAGCGTCGGG CCCAAAAGCA AGACCGTGCA ACGCCGCTAT
TGCCGCCTCC TGGCCCAATT CGGCCCAGAA CTGACCATCC TGCGCCACAC CCCAGTTGAG
GAACTCCGCC AGCATTGGTC CCTTCTCGGC GAGGCTATCG GTCGCATGCG CTCGGGCCGC
GTCCAGCGTC AGCCCGGGTT TGACGGGCAA TACGGGGTCA TCCGCGTCTT CAGCGACCGG
GAACGCCGCG AGTGGCGCCA CGGCCCGAGC CTGGTCCTGC CCACAGATCT GGACCACCCG
TCCTGCACCG CCCAGACCGC CCCTGGTGGC GCTGGGGCCG GGAGGGAAGA AGGCGATGTC
GAAAAGCACC CGACCCCGAA CCCCGAACAG GAAGCCGCTG TCCAGGCCGG ACCGGAGCCA
GTGCTCGTCC AGGCCGGACC GGGCACCGGA AAAACCAGAA CCCTTCTGGC CCGGGTTCGC
CGGCTGCTCG AGCAGGGAAC GCCAGCCAAG GAGATTTTGC TTCTGACCTT CACCCGGGCC
ACGGCCGAGG AACTCCGAAA CCGCCTCCAG CTGGAAACGT CGGCTGCCGC CGAAATCCAG
GCCGGGACCC TGCACAGCTT GGCCTATGCC CATTTTGTCC AGCACCACGG CCGGGACCCG
GTCCTTCTCT CCGAAGAAGA CGCCAGGAGC CTCTTTGTGA AAGCTGTGGC CGCCGATCGC
CACGAGGGCC AACAGATGTG GACCCGCTGC CAGTTGGCAC GGGAATCCGG TATCCCCTCC
CGGGTACCCG CCCCCGGAGA GGCCGAGTAC CAGGAGGCCA AGGCCCGGCG CGGTGTCGTC
GATTTCACCG ACCTGCTCCA AAAATGGCTC CAGGGACTCA CGAACGGGGC TCGGCCGGAG
TGGACCCAGG TCCTGATCGA TGAAATTCAG GACCTGACCG GGCTCCAGCT GAACCTGGTC
CAGGCCCTTT GCCCGCCCCA GGGCCACGGT TTCTTCGGTA TCGGCGACCC GGATCAATCC
ATTTATGGCT TCCGCGGGGC GGTCAGCACC ACCGCCGAGT GGCTCAGCCG GACCTGGCCC
GAACTGACAC CCCTCTCCCT GCAGCGCAAT TACCGCGCCG CCGCGCCCCT GGTCCAAGCC
GCCGGAACGG TTTTCCCTGA ACGGCCGCCG CTACGCCCCC AACGTTCAGT CCAAGGACAG
ATCATTGTCT GTGAAACACC CAGCGCCTGG CGAGAAGCCT CCTGGATCGC CACCCAGGCC
CGGACTCTGA TCGGGGCCAC AGCCCACAGC CAGGCCGATA GTGGCGACAC CGGCGAGACC
TCCCCCGGGG ACATCGCCGT GCTCGTACGC ACCAGAGCCT TGCTGCGGCC GCTGGCGGAA
AAACTGGACC AGGCCGGAGT GCCGTGTTCG GTGCCCGAGG AAGAGCCGTT CTGGCGCGAC
AACCGGGTCC AGGACCTCCT GGAAACGGTG CGCGCGGCCT TCGACAGGGC CGTCACCCCG
CCGTGGGATT GTCCTGAGGC CGTTCTCGGG CAAGGGCCGG CGGGTATGGC CGCGTATTGG
GCCCAATCGG GGCCCGTCGA TCCGCTTTTC TGGCAAAGCC GCGCCTTTCA GCAATTGCAG
CAGGCCTTTG CCGACCAGGG GGATTGGGAG GCCCTGCTGA CTTGGTTGGC TCGACAAGAC
ACCCTTGATA CGGTCCGGCA TCGGGTGGAA AAAGTCCGCC TCATGACATT GCATGCCAGT
AAGGGGCTCG AATTCACTGC GGTTTTCCTC CCAGCCCTCG AAGAAGGACT GCTCCCGTAT
GGCGCAGGCG ACTTCGGTTC AAACGAGGAA AATACGGCCT TGACGGCGGA CCGTCTGGCG
GAGGAAAAAA GACTTTTCTA CGTCGGCTTG ACCCGAGCCA AACGCTATCT CTATCTCAGT
CATAGCCAGG AACGACGCCT CTACGGTCAA ACGCTCGCCG GACGGCCGAG CCGTTTTCTG
CAATCGCTGC CACCGTCTCT GGTGCAGACC AAAACCGTGG TCGCCAGGAC GAAGCAGAGA
AGCACCCAAT TGACGCTGAT GTAA
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| Protein sequence | MSETQLYYAD LHIHSKYSRA TSRQLTPRHL AAWGWVKGID LLATGDFTHP AWLALLQEQL
EEDGRGLLRL KEPTRLEQEL PWLETPVPKA PRFMLGTEIS SIYKRGGVVR KVHNLVYLPN
FDAVRRFNER LDQVGNLEAD GRPILGLDSE HLLEMVLETD PLGFVIPAHI WTPWFSLFGS
KSGFNALEEC FGSLSQHIFA AETGLSSDPA MNWHWSALDH LTLVSNSDAH SGANLAREAT
LFSGTMDFAT IREGLRDRST GTFQGTLEFF PEEGKYHHDG HRKCGLSWDP RQTEDHGGIC
PVCGRPVTVG VLNRILELAD RKEPLRPPDH PDFVSLVPLP ELLSELLSVG PKSKTVQRRY
CRLLAQFGPE LTILRHTPVE ELRQHWSLLG EAIGRMRSGR VQRQPGFDGQ YGVIRVFSDR
ERREWRHGPS LVLPTDLDHP SCTAQTAPGG AGAGREEGDV EKHPTPNPEQ EAAVQAGPEP
VLVQAGPGTG KTRTLLARVR RLLEQGTPAK EILLLTFTRA TAEELRNRLQ LETSAAAEIQ
AGTLHSLAYA HFVQHHGRDP VLLSEEDARS LFVKAVAADR HEGQQMWTRC QLARESGIPS
RVPAPGEAEY QEAKARRGVV DFTDLLQKWL QGLTNGARPE WTQVLIDEIQ DLTGLQLNLV
QALCPPQGHG FFGIGDPDQS IYGFRGAVST TAEWLSRTWP ELTPLSLQRN YRAAAPLVQA
AGTVFPERPP LRPQRSVQGQ IIVCETPSAW REASWIATQA RTLIGATAHS QADSGDTGET
SPGDIAVLVR TRALLRPLAE KLDQAGVPCS VPEEEPFWRD NRVQDLLETV RAAFDRAVTP
PWDCPEAVLG QGPAGMAAYW AQSGPVDPLF WQSRAFQQLQ QAFADQGDWE ALLTWLARQD
TLDTVRHRVE KVRLMTLHAS KGLEFTAVFL PALEEGLLPY GAGDFGSNEE NTALTADRLA
EEKRLFYVGL TRAKRYLYLS HSQERRLYGQ TLAGRPSRFL QSLPPSLVQT KTVVARTKQR
STQLTLM
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