Gene Dret_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2389 
Symbol 
ID8420249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2732368 
End bp2733714 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content57% 
IMG OID645038990 
Productglutamine synthetase, type I 
Protein accessionYP_003199249 
Protein GI258406507 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.01555e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA CCCCGATTTT CAATTGCAAG AATGCCGACG ACGTCCTCAA GGCCGTCAGG 
GAAAACGACA TCAGCTTTAT CCAGTTCTGG TTTACTGATG TGCTGGGCAC CTTGAAAAGT
TTTCAGGTCA CGCCGAGCGA ACTCGAAGAG GCCTTTGAAG AGGGCATGGG CTTTGATGGT
TCCTCTATTG AAGGATTTTC CCGCATCCAC GAAAGCGATA TGGTCGCCTT CCCTGACCCG
ACTTCGTTCC AGGCCGTCTC TTGGCGTCCT ACCGACCGCC CGGTGGCTCG GATGTTCTGC
GATATCAAGC GCCCCGACGG AACCCCGTAC GAAGGCGATG GCCGGTATGT GCTGAAAAAG
CTCATCAACA AGGCCGCTGA AAAGGGCTAC TCCTATTATG TCGGCCCGGA ACTGGAGTTC
TTCCTCTTCG AGAATTCCCG TGAGCCGAAA ACCCTGGATT TTGGCGGCTA TTTCGACGCT
CCGCCCCTGG ATCTGGCCAA CGACATCCGC CGGGACATCA TTTTTTCTTT GAACAAGATG
GGCATCCAGG TTGAGTACAG CCACCACGAA GTGGCCCCCA GCCAGCACGA GATCGACTTG
CGCTATCAGG AAGCCCTGAA AATGGCCGAC ACCGCTGTGA CCTACAAGGT CATCGTCAAG
GAAGTCGCCC GCAAGCACGG CGTCTACGCC ACCTTCATGC CCAAGCCGAT CTTTGGTGAA
AACGGCAGCG GTATGCACGT CCACCAGTCC CTGTTCAAAA ACGGCAAAAA CGCCTTTTTC
GACACCAAGG ACGAATACGG CCTGAGCGAA ACCGGTAAGC AGTATATCGC CGGCCTGCTC
CGCCACGCTC CCGAGCTCAC TGCGGTGACC AACCAGTGGG TCAACTCCTA CAAGCGTCTC
GTGCCCGGCT ACGAAGCCCC GGTATATGGG GCCTGGGCCC GCCGCAACCG CTCTGCCCTG
TTGCGCGTGC CGATGTACAA ACCCGGCAAG GAAGCCGCGA CCCGTGTCGA ACTGCGTTCG
CCGGACCCGG CCTGCAATCC CTATCTCGCC TTTGCGGTCA TGCTCGCCGC CGGCCTGAAG
GGCATTGAGG AAGGCTACAC CCTGGAAGAT CCGGTCGAAG CCGACATCTT TGAAATGAAC
GATCAGGAAC GCGCCGACCG TGGGATCGAG AACCTCCCCG GCAGCCTGCA TGAAGCCGTT
GCCGCCATGG AAGACAGCGA ACTGCTCAAG GAAGCCCTGG GCGAACATAT CTTCACCAAG
TTCATTGAGA ACAAGAAGAT CGAATGGGAC AACTACCGCA CCCAGGTCAC CAATTACGAA
ATCGAAAAGT ATTTGCCGGT CCTGTAA
 
Protein sequence
MNETPIFNCK NADDVLKAVR ENDISFIQFW FTDVLGTLKS FQVTPSELEE AFEEGMGFDG 
SSIEGFSRIH ESDMVAFPDP TSFQAVSWRP TDRPVARMFC DIKRPDGTPY EGDGRYVLKK
LINKAAEKGY SYYVGPELEF FLFENSREPK TLDFGGYFDA PPLDLANDIR RDIIFSLNKM
GIQVEYSHHE VAPSQHEIDL RYQEALKMAD TAVTYKVIVK EVARKHGVYA TFMPKPIFGE
NGSGMHVHQS LFKNGKNAFF DTKDEYGLSE TGKQYIAGLL RHAPELTAVT NQWVNSYKRL
VPGYEAPVYG AWARRNRSAL LRVPMYKPGK EAATRVELRS PDPACNPYLA FAVMLAAGLK
GIEEGYTLED PVEADIFEMN DQERADRGIE NLPGSLHEAV AAMEDSELLK EALGEHIFTK
FIENKKIEWD NYRTQVTNYE IEKYLPVL