Gene Dret_2317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2317 
Symbol 
ID8420177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2633939 
End bp2634580 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content58% 
IMG OID645038920 
Productheterodisulfide reductase subunit C 
Protein accessionYP_003199179 
Protein GI258406437 
COG category[C] Energy production and conversion 
COG ID[COG1150] Heterodisulfide reductase, subunit C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA TCAATCTTTC CACCCACACC GACCCTGCCT TTACCCAACA GGTCAACGAG 
GAAAGTCACC AGGATGTCGC CCTGTGCTAC CAATGCGGGA ACTGCACGGC GGGCTGTCCT
TACACCTTCG TCTATGACAT CCCGGTGCAC CAGATCATGC GCCTCGTTCA GGCGGGACAA
AAAGACACGG TTCTGCGCAG CCGGTCGCTT TGGCTCTGCG CCACCTGTCA ATCCTGCACC
ACCCGCTGTC CCAACAATAT CGATGTGGCC CAGGTCATGG ATGTTTTACG GCATATGGCC
CGCCGGGAAG GCTACGTCAC TGAGCGCAAC GTCAAACTCT TTTATGACGC CTTCCTGGAA
TCGGTCCACA AACACGGCCG GGTCTATGAA CTCGGGGCCA TGTCCTCGTA CATCGCCCAC
AGCAAACGGG TCATGACCGA TGCCGAATTG GGCCCCACGG TCATGGCCAA GGGCAAACTC
AGCTTCACCC CCCACAACAT TGAGGGCAAG GAGCACGTCG CCGCAATTTT TGATCGCTAT
ATGGAAAAAC AGGAACAAGG GCGGGAAGCC TACCGTCCGT TTCAGGCCGA ACGTATGAGT
CCAGTGGCCG CGTGGCTGCG CCGACTGAGG AGGGAAGAGT AA
 
Protein sequence
MQTINLSTHT DPAFTQQVNE ESHQDVALCY QCGNCTAGCP YTFVYDIPVH QIMRLVQAGQ 
KDTVLRSRSL WLCATCQSCT TRCPNNIDVA QVMDVLRHMA RREGYVTERN VKLFYDAFLE
SVHKHGRVYE LGAMSSYIAH SKRVMTDAEL GPTVMAKGKL SFTPHNIEGK EHVAAIFDRY
MEKQEQGREA YRPFQAERMS PVAAWLRRLR REE