Gene Dret_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2301 
Symbol 
ID8420159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2613880 
End bp2615301 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content60% 
IMG OID645038902 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_003199163 
Protein GI258406421 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCATTG CATTGGATCC GGCACGGGAA TCGAAAATAG CCGACCCGGG ACAGGCCCAT 
TGGGGCCGGC AGGAAATGCG GCTGGCGGAA AAGGAAATGC CGGGGCTCAT GGCCCTGCGG
GAAAAGTACG GTCCGGATAA GCCGCTTTCA GGAATGAAAA TCACCGGCAG TCTGCACATG
ACCATTCAGA CCGCCATGCT TATCGAAACC TTGTACGCCC TGGGCGCAGA CATCCGTTGG
GCGTCCTGCA ACATCTTTTC CACTCAGGAT CACGCGGCTG CGGCTATTGC CGAAGCGGGC
ACGGCCAAGG TCTTCGCCTG GAAGGGGGAG ACCCTGGAAG AGTATTGGTG GTGCACGGAG
CAGGCCCTGA CCTGGCCCGA CGGCAGCGGC CCTGACCTCA TCGTGGACGA CGGCGGCGAC
GCGACGCTGT TCGTCCATCA GGGCGCCAAG ATGGAAAAAG ATCCGGCGTT GCTTGAGCAA
AAGACGGACA ACAAGGAATT TCAGTGCGTG CTCGACCGGC TCGTGGACAG CTACAACCGG
GACCCGCAGA AATGGACCCG CATTGCGGCC AACATCCGCG GGGTCTCCGA GGAAACCACC
ACCGGCGTGC ACCGCTTGTA CCAGATGGCG GAAAGCGGCG AGCTGCTTTT CCCGGCCTTC
AATGTCAACG ATTCGGTGAC CAAATCCAAG TTCGACAATC TCTACGGCTG CCGGGAATCC
CTGGCCGACG GCATCAAGCG GGCCACAGAC GTGATGATCG CCGGCAAGAT CGTGGTCGTC
TGCGGCTACG GTGACGTTGG CAAAGGGTGC GCCCAAGCCA TGAAGGGGCT CGGTGCCCGG
GTCCTGGTGA CCGAGGTCGA CCCCATCTGC GCCCTGCAGG CGGCCATGGA AGGCTATGAG
TTGACGACCA TGAACCAGGC GGCTTCGCTT GGCGACATTT TCGTCACCGC CACCGGCAAC
TACCACGTCA TCACCGGCGC GCATATGGAG CAGATGAAAG ACGAAGCCAT CGTCTGCAAT
ATCGGGCATT TCGATAACGA AATCGAGATG AATTATCTCG AGGACAACCC CAATTGCCAT
AAGGATAACG TCAAGCCCCA GGTCGATAAA TGGACCCTGG AGTCCGGCAA TTCCATCATT
GTCCTGGCTG AAGGGCGACT GGTCAATCTG GGGTGCGCCA CCGGACACCC GAGTTTTGTC
ATGTCCAACA GCTTCACCAA CCAGGTCTTG GCCCAGATGG ACCTGGCCCG GAACGAATAT
GAGCCCCAGG TCATGGTCCT GCCCAAATAC CTGGACGAGG AAGTCGCTCG GTTGCATCTG
GAACGTATCG GAGTGGTGCT GGAGAGCCTG ACCCAGGAGC AGGCCGACTA CATCGGCGTG
CCGGTCAACG GACCTTTCAA GCCCGAGCAT TACCGGTATT AA
 
Protein sequence
MAIALDPARE SKIADPGQAH WGRQEMRLAE KEMPGLMALR EKYGPDKPLS GMKITGSLHM 
TIQTAMLIET LYALGADIRW ASCNIFSTQD HAAAAIAEAG TAKVFAWKGE TLEEYWWCTE
QALTWPDGSG PDLIVDDGGD ATLFVHQGAK MEKDPALLEQ KTDNKEFQCV LDRLVDSYNR
DPQKWTRIAA NIRGVSEETT TGVHRLYQMA ESGELLFPAF NVNDSVTKSK FDNLYGCRES
LADGIKRATD VMIAGKIVVV CGYGDVGKGC AQAMKGLGAR VLVTEVDPIC ALQAAMEGYE
LTTMNQAASL GDIFVTATGN YHVITGAHME QMKDEAIVCN IGHFDNEIEM NYLEDNPNCH
KDNVKPQVDK WTLESGNSII VLAEGRLVNL GCATGHPSFV MSNSFTNQVL AQMDLARNEY
EPQVMVLPKY LDEEVARLHL ERIGVVLESL TQEQADYIGV PVNGPFKPEH YRY