Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2277 |
Symbol | |
ID | 8420135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2587228 |
End bp | 2587719 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645038878 |
Product | rfaE bifunctional protein |
Protein accession | YP_003199139 |
Protein GI | 258406397 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCA TTCCCCCCAA TCCTAAGCTC TATTCCCGAG AAGCCGCCCG TATTCTGCGC CACAGCGACT GGAAGGGCCA ACACATCGTT TTCACCAACG GGTGCTTCGA CCTGCTCCAC CCCGGTCATG TCGACTATCT CCAGCGCGCC CGGGCCCTCG GGAGCTTTCT TTGCGTCGGT CTCAACAGCG ACGCCTCGGT CGCCCGCCTC AAAGGAGTCT CCCGGCCGGT GGTGGCCGAA GCGGCGCGCG CCTTTGTCCT TGCCGGCCTT GCTTGCGTCG ACGCCGTCGT GGTCTTCGAC GAGGACACCC CTTACGAATT GATCTGTGCC GTCCAGCCGC ACACCCTGGT CAAGGGTGGG GATTGGAGTG TCGAAGCCAT TGTCGGGCGC GATATCGTTG AACAGGCCGG GGGAGAGGTC CTGAGTCTGC CGGTTTTAGC CGGGTACTCG ACCAGCGCCC TCATCCAACG CATCCAGCAG GACCGAGCAT GA
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Protein sequence | MSTIPPNPKL YSREAARILR HSDWKGQHIV FTNGCFDLLH PGHVDYLQRA RALGSFLCVG LNSDASVARL KGVSRPVVAE AARAFVLAGL ACVDAVVVFD EDTPYELICA VQPHTLVKGG DWSVEAIVGR DIVEQAGGEV LSLPVLAGYS TSALIQRIQQ DRA
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