| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2261 |
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| Symbol | |
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| ID | 8420119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2570686 |
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| End bp | 2572662 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038862 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_003199123 |
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| Protein GI | 258406381 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAATA TTGAAGAAGC GTGCCCCACT GGGGCCTCCT GTGGTTGCAG TCATTGCGGT
GCAAGCGGCC CTGAAAAAGA GGGATTGCGC CAGGAACTGC GGCAGATCCT GCCCGCAGCA
GCAGTTTTTG CGGTTGCCCT CACCGCGCGG CTGGCCCATC TCGAGCCAGA CTGGCTCTGG
GTGGTCGCCT TGTTGGGCAG CTATGTCTGG ATTGGCCGGG AGATCCTGGC GGCCACCTGG
CGCAATATCC GGCAGGGAAA AATCTTTGAC GAATTGTTTC TCATGAGTCT GGCGACGCTG
GGAGCCATTG GCATCGGGGC CTACGGCGAG GCTGTGGGCG TGATGCTTTT CTACCGCATC
GGCGAGGCCC TGCAGGATGC GGCCGTGGAT TCCTCGCGCC GCTCTATCCA GGGGCTACTC
GCTCTGCGTC CGGATGTCGC CGCTGTTCAG CGTGAGGGCA GCTTTGTGCA GGTCGACCCC
GCTTCTGTTC AGGTGGGGGA ATTGATCCGG GTCCGTCCGG GAGAACGGGT CCCTCTCGAT
GGCGAAGTGG CTGAAGGGTC GGCCTCCTTG GACACCGCAG ATCTGACCGG AGAGCCTCTG
CCGCGTTTCG TCGAGCCGGG AGAATCGGTG CTCGCCGGGA TGGTCAACCA GTCCGGTGTG
CTCCATGTCC GGGTGATTCG GGCCGCACAC CAGTCCACTG TGGCCCGGAT CCTGGAACTG
GTGCAGGGAG CGGGGCAGAA AAAGGCGGAG ATCGAGCAGT TCATAACGGT GTTCGCGCGG
TATTATACCC CGATTGTGGT TTGTGCTGCT CTGGCGGTGG CCTTGGCCCC CCCGCTGCTC
TCCCGCCTGC CGCTGGCCGC GAGCTGGTTT GCCGCTCCTT TGTCCTTCAG TGAGTGGATC
TATCGGGGAT TGATTTTTCT GGTCGTTTCC TGCCCCTGCG CTCTGGTCCT GTCCATTCCC
TTGACCTTTT TTGCCGGAAT TGGGGCGGCG TCCCGGCGCG GTATCCTCAT CAAGGGGGCC
AATTTTCTGG AGGGTTTGTC CCGGGTGCAG ACGATTTTGT GGGACAAGAC CGGGACCCTG
ACGAGCGGAG CCTTTGCGGT TTCAGAGATT CTGACCGAGA AGGGCTGGAG CCGGGAGGCG
GTGCTGGAGT ATGCAGCCCT GGCCGAGATG CATTCCAGTC ATCCGGTCGC TGTGGCGGTG
CGCGAGGCCT ATGCGGGGCA GCTCAATGAA GAGGCGGTCA CCACCTATGA GGAGCATTCC
GGTCTCGGCG TCCAGGCCCG GGTCAATGCC TCTTTGGTGG TGGTCGGCCG GAACCAACTC
CTGGCTGGCA AAGGGATTGC GATCCCGGAA CCCCGGCGCC GGGGTTCCGG CACGCGGCTG
CATGTCGCCA TTGACGGTGA CTATGCCGGA ACGCTTGTCA TCACAGATAC AGTGCGCCGT
GACAGCGCCG CAGCGATTAC CCGTCTCCGT GAGGCCGGGG TGCGCGAACA GCATATGCTC
ACCGGCGACG CTGAGGCCAC GGCCTGGGAT GTGGCCCAAG GCTTGGGTCT GGATCAGGTT
CACGCCCGCC TGTTGCCCCA GGACAAGGTC GGTGTCGTGG AACGGTTTCT GGAAAAGAGC
CGCTCCGGTT CGCGAGTTGT TTTCGTCGGC GATGGGCTGA ACGACGCCCC GGTGCTGACC
CGTGCGGATA TCGGCGTGGC CATGGGCGGT GCCAGTGGCC TGGATGCGGC CATCGAGGCC
GCCGATGTGG TGCTCATGGA GGCCACTCCA AGCAAGATGG CCGAAGCGAT CAGACTTGCC
AAGCGGACCC GGCGGGTGGT CTGGGAGAAT ATTGGGCTGG CCCTGGGCAT CAAGGGTGTC
GTCCTGGTTT TGGGGGCCGT GGGGTTGGCC AATATGTGGG GGGCGATCTT TGCCGATGTG
GGCGCTGCCT TGCTGGCGGT GGTCAACAGC CTGAAGGTGC TGCGGTTCCG GGAATGA
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| Protein sequence | MHNIEEACPT GASCGCSHCG ASGPEKEGLR QELRQILPAA AVFAVALTAR LAHLEPDWLW
VVALLGSYVW IGREILAATW RNIRQGKIFD ELFLMSLATL GAIGIGAYGE AVGVMLFYRI
GEALQDAAVD SSRRSIQGLL ALRPDVAAVQ REGSFVQVDP ASVQVGELIR VRPGERVPLD
GEVAEGSASL DTADLTGEPL PRFVEPGESV LAGMVNQSGV LHVRVIRAAH QSTVARILEL
VQGAGQKKAE IEQFITVFAR YYTPIVVCAA LAVALAPPLL SRLPLAASWF AAPLSFSEWI
YRGLIFLVVS CPCALVLSIP LTFFAGIGAA SRRGILIKGA NFLEGLSRVQ TILWDKTGTL
TSGAFAVSEI LTEKGWSREA VLEYAALAEM HSSHPVAVAV REAYAGQLNE EAVTTYEEHS
GLGVQARVNA SLVVVGRNQL LAGKGIAIPE PRRRGSGTRL HVAIDGDYAG TLVITDTVRR
DSAAAITRLR EAGVREQHML TGDAEATAWD VAQGLGLDQV HARLLPQDKV GVVERFLEKS
RSGSRVVFVG DGLNDAPVLT RADIGVAMGG ASGLDAAIEA ADVVLMEATP SKMAEAIRLA
KRTRRVVWEN IGLALGIKGV VLVLGAVGLA NMWGAIFADV GAALLAVVNS LKVLRFRE
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