| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2251 |
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| Symbol | |
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| ID | 8420109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2556950 |
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| End bp | 2558314 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645038852 |
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| Product | serine dehydratase alpha chain |
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| Protein accession | YP_003199113 |
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| Protein GI | 258406371 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.472865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.778553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCTG TTGAGACCTC AGTTTTCGAA CTCTTTCGTA TCGGACCGGG CCCCTCCAGT
TCGCACACCA TCGGCCCCAT GCGCGCCGCA GCCCGTTTTC TCGCTGAACT GGAGCGCCTT
GACGCCTCCC AACGCAACGA GGCCGTCCAG GTCAAGATCC ATCTCTACGG CTCCTTGAGC
GCCACAGGCC AGGGCCACGG CACTGTGGAG GCGGTTCTCG CCGGTCTGCT GGGCCACGAA
CCCGAAACCG CACCGCCGGA CATCCTTGAA CAGCTCCGGA CCCATCCAGC CCAGCACCGG
CTTGCTCTCG GCGATCGCGA ACTGCCACTC TCGGCGGGGG ATGTCATTTT CGACACCCTG
GACCACCCTT TTCCCTGGCC CAATACGCTG CGGTTTCTCC TCTACGGGCC GGGAGGGGTA
TTGCTGGAGC GGGAATACTA CTCCATAGGC GGCGGGTTTC TTTTGGAAAA GGGAGAAGAG
GCCGCTGCCA AACGTCCTCG TTTGCCCTAC CCCTACCAGA ATATGGCCGA GTGCAAGACA
CAACTCACCA CCCATGGGCT GCGGCTGCAC CGTCTGATGC TCGAAAACGA GAAGGCCCTG
ACTGGGGCCT CGGAAAACGA GATTTATGAC CGCTTGGAGC ATTTGCTGGA CTGTATGGAA
CAGGCCGTCG ACCGGGGGCT TCAGACCAGC GGGGTTCTGC CCGGCCCGCT GGGGTTGCAG
CGCAAGGCCC CGGCCCTGCA CCACCGCCTG CAAAGTGTGG TCTACGAACA AGAAAAGATC
CTCTTGGCGC TCAACGCCTA CGCCCTGGCC GCGGCCGAGG AAAACGCCGC CGGGCACACC
ATCGTCACCG CGCCCACAGC TGGCGCCTCC GGCATTGTCC CGGCCGTGGT CTACCTGCTC
TCCCATTCTC TGGGCCTGGG CCGCCGCGCC TTGTGCCAGG GGCTGCTGGC CGCGGCCACG
GTCGGCTTTC TGGCCAAACA CAACGCCTCC ATCGCCGGGG CTGAAGTCGG CTGCCAGGGC
GAGGTCGGCG TAGCCTCGGC CATGGCCGCC GCCCTGGTCT CCTACGCCAA GGGACACCGC
TTCAGGGTCA CGGAAAACGC GGCCGAAACC GCCTTGGAGC ACCACTTGGG GCTGACCTGC
GACCCTGTCG GCGGCTATGT CCAGATCCCG TGCATCGAAC GCAACGCCAT GGGGGCCATC
AAAGCCTACA ACGGATTTTT GATCGCCACT GCGGTGGCCC CGACCCTGTA CAAAGTCGAC
CTGGACAAAG TCATTCAGGC CATGGCCGCC ACCGGGCGCG ACCTGTTGCC CAAATACCGG
GAAACTGCGG CCGGCGGTCT GGCCCTGTGC CTCGGCAACT GCTGA
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| Protein sequence | MPPVETSVFE LFRIGPGPSS SHTIGPMRAA ARFLAELERL DASQRNEAVQ VKIHLYGSLS
ATGQGHGTVE AVLAGLLGHE PETAPPDILE QLRTHPAQHR LALGDRELPL SAGDVIFDTL
DHPFPWPNTL RFLLYGPGGV LLEREYYSIG GGFLLEKGEE AAAKRPRLPY PYQNMAECKT
QLTTHGLRLH RLMLENEKAL TGASENEIYD RLEHLLDCME QAVDRGLQTS GVLPGPLGLQ
RKAPALHHRL QSVVYEQEKI LLALNAYALA AAEENAAGHT IVTAPTAGAS GIVPAVVYLL
SHSLGLGRRA LCQGLLAAAT VGFLAKHNAS IAGAEVGCQG EVGVASAMAA ALVSYAKGHR
FRVTENAAET ALEHHLGLTC DPVGGYVQIP CIERNAMGAI KAYNGFLIAT AVAPTLYKVD
LDKVIQAMAA TGRDLLPKYR ETAAGGLALC LGNC
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