| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2243 |
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| Symbol | |
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| ID | 8420101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2547748 |
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| End bp | 2548827 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645038844 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_003199105 |
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| Protein GI | 258406363 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.726084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCGA AAACCATACA CGACATTTCC TTCGACGACC TCGCCGCCTG GCTCACTGAA
CAGGGGCAGC CACGTTTCAG GGCCGAACAA ATCTGGCAAT GGCTGTGGAT CAAAGGCGCC
ACAAGCTTTG AGGATATGAC CAATGTCTCG AAATCCCTGC GAAGCGCCTT GTCGCAGGTC
TTCCCCATAG CGCTGCCGAC TGTAGCCGAA GTCCACACCA GCGCCGACGG GACCAGAAAA
TTCCTGCTCA ACCTCCACGA CGGCCATGTG CTGGAGACGG TGCTCATTCC CGGCGGGGAA
CACTTCACCC AATGTCTCTC GACACAGGTC GGCTGCAATC TGGGGTGCAC CTTTTGCAGC
ACCGGACAGA TGGGATTGAC TCGGAATCTG AGCGCGGCAG AGATCGCCGG ACAGGTCATC
GTGGCCCGCA ATCACCTCTG GCAGACCGGT ACGGGTATGC GGTTGCGCAA CCTCGTCTTT
ATGGGCATGG GCGAGCCCCT GCTGAACTGG GAAAACGTTG ACAACGCCCT GGATCGGCTC
ATCCATGCCT CGGCCATGAA TTTTTCTCCG CGCCGGGTCA CGGTTTCCAC CGTAGGCGTG
CCGGGAACCC TGGACGCCCT GGGCCACAGC CACAAGGCGT CCCTGGCCGT CTCCCTGCAC
GCCCCGAACC AGGAACTGCG CGAGAAGATC ATGCCCAGGG CCGCTCGAAT GCTTCCGCTA
CCGGATCTTC TCGCACGGCT TCGCAGCTAC CCCATGGCCC CGCGGCAGCG GGTCACCATC
GAATACGTTC TTTTGGGCGG GGTGAACGAC AGCCTCGACC AGGCCCGCCA ACTCGTGCGC
TGCCTCAATG GCATCCGTTG TAAGGTCAAC CTCATCGCGT TCAACCCCTG TCCGGGACTC
CCCTATTCGG CCCCCGAGAC CGAGCAGGTC CTTGCGTTCG AGACGTTGCT CCGCGACAAG
GGGTTGACGG CGACCTTGCG CAAAAGCAAA GGGCAGGATA TTTCCGCCGC GTGCGGCCAA
CTCAAGACCC GCCGCACTGC CGGCGCAAAC AATTGCGGCC CCACTGTCAC CAACACATAA
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| Protein sequence | MRPKTIHDIS FDDLAAWLTE QGQPRFRAEQ IWQWLWIKGA TSFEDMTNVS KSLRSALSQV
FPIALPTVAE VHTSADGTRK FLLNLHDGHV LETVLIPGGE HFTQCLSTQV GCNLGCTFCS
TGQMGLTRNL SAAEIAGQVI VARNHLWQTG TGMRLRNLVF MGMGEPLLNW ENVDNALDRL
IHASAMNFSP RRVTVSTVGV PGTLDALGHS HKASLAVSLH APNQELREKI MPRAARMLPL
PDLLARLRSY PMAPRQRVTI EYVLLGGVND SLDQARQLVR CLNGIRCKVN LIAFNPCPGL
PYSAPETEQV LAFETLLRDK GLTATLRKSK GQDISAACGQ LKTRRTAGAN NCGPTVTNT
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