| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2239 |
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| Symbol | |
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| ID | 8420097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2542621 |
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| End bp | 2543799 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038840 |
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| Product | S-adenosylhomocysteine deaminase |
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| Protein accession | YP_003199101 |
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| Protein GI | 258406359 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.975396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTAT CCCGAACATC CTCTGCAGAG ACACCGATCT TGCGGCGCTC GCGCACCTTG
CTCACACGGA ATCCGGCCCG GCCGGTGATC GACAATGGAG CGATCCTGGA AGCCAACGGG
ATGATTTGCG CTGTCGGTAA ATACGGTGAG CTATCCCAGA CGCACCACGC TCGGCTGGTC
GACGAAGGAG AGACGGTGTT ACTGCCCGGG CTGATAAACG CCCACACCCA TACCGAACTC
AGCCACTTGC GGGACCGCAT CCAGCCCGGC GGCGGATTCG AGGACTGGGT CGCCCAATTG
CTTGCGCTGC CGGCCCGGGA TCTGGACACC AAGGCGGTCT CCAAGGCCAT AGACGAAATG
GCCGCCGGTC AGATCTGTGC CGTGGGAGAC ATCAGCGGGA ACAATCCGCA GGCCATGGCC
TCGTTATGGC GCCAAAGCGA TCTCCATGCC CTCCTTTGGG TCGAGCAGAT CGGGTTCGCC
CCTTTGCCCC AGGGCCAGCC GCGAGGTCTG CCTGATGCCG GGGCAACTCC AAAGCTGCGC
GTCGCTCCTG CCGGACACGC CCTGTATTCA ACAAGCCCGG AGACTTTGCG CCAGACCAAG
GCCTGGTGTC GCTCCCACGA ACTCCCCTTC AGCCTCCATC TCGCCGAACA TTCCGGTGAA
ATAGAATTTT TGACCACCGG CCGCGGCCCG TTTGGCGCCA TGCTGACCAA ACGGCTGGTC
CCCAAATCCT TTTCTCCGCC GGGCCTGCAC CCGGTTGCCT ATGCCGATTC GTTGGGACTT
CTGGATTCCT CCACCCTGGT GGTGCACGCT GTTCACCTCG ACCCGGGCCA CCCGCACCTT
ATCGCGCACC GCGGCTCTAC TGTCTGTCTG TGCCCGCGCA GCAACGATTT CATCGGCGTG
GGGCGCGCTT TGTGGGAAGC CCTGGACGCC GCAGGTGTTC CCTTGTGTCT GGGTACGGAC
AGTCTGGCCT CAAATTGGGA CCTCGATTTA TGGCAGGAGG CCTGGTATAT CGCCCAACAT
TGGTCCGGCA CACTGACCCT GGACAAGCTG GTCAGCTTCA TGACCACGAC CCCGGCACGC
ATCCTGGGCC TGCCACGTCT GGGCCGCCTT GCCCCCGGCA AACGGGCTGT CTATGCCCGG
CTGTCTCTGG AGAAGGCGAA CCGCCTTCCT CTTGCCTGA
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| Protein sequence | MPLSRTSSAE TPILRRSRTL LTRNPARPVI DNGAILEANG MICAVGKYGE LSQTHHARLV
DEGETVLLPG LINAHTHTEL SHLRDRIQPG GGFEDWVAQL LALPARDLDT KAVSKAIDEM
AAGQICAVGD ISGNNPQAMA SLWRQSDLHA LLWVEQIGFA PLPQGQPRGL PDAGATPKLR
VAPAGHALYS TSPETLRQTK AWCRSHELPF SLHLAEHSGE IEFLTTGRGP FGAMLTKRLV
PKSFSPPGLH PVAYADSLGL LDSSTLVVHA VHLDPGHPHL IAHRGSTVCL CPRSNDFIGV
GRALWEALDA AGVPLCLGTD SLASNWDLDL WQEAWYIAQH WSGTLTLDKL VSFMTTTPAR
ILGLPRLGRL APGKRAVYAR LSLEKANRLP LA
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