| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2235 |
|---|
| Symbol | |
|---|
| ID | 8420093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 2539261 |
|---|
| End bp | 2540010 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645038836 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_003199097 |
|---|
| Protein GI | 258406355 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGA ACAAAGCCAC ATTTATGCGA ATTTTCCACA CTGCTTGTGC CGTTTTGGGC
AGCCTTGTGC TGCTGTGGTC TTTGGCTGGA TGCATGGGAT CGGTCGAAGG ACCGCCGCAC
TCTGCGAGCA TCCCCAGCAA AAGCACAGGC ACCTTCCGGC CGTATACCAT CAACGGCCAG
ACGTACCGCC CCCTGCGTTC AGCGAATGGC TATGTCGAGC AGGGCATCGC CTCGTGGTAC
GGCTCAGACT TTCATGGCAA GCCCACCGCC AACGGCGAAC GCTACGATAT GCACGCCATG
ACCGCCGCCC ACCGCACCTT GCCCATGAAC ACCAAACTCA TGGTCACCAA TCTGCGCAAT
AACAAGCAGA CCACGGTCCG AATCAACGAC CGCGGTCCCT TCGTCAAGAA CCGCATCCTG
GATCTCTCTT TTGCCGCAGC CAAGCGTCTC GGCGTCGTCG GCCCGGGGAC GGCCCCGGTG
CGCATCAAGG CTGTCGGCTC CTGGCCGCAA CAGGTGCGCG GGCGCTTTTA CATCCAGACC
GGCTCCTACC GGGAGAAGGA GAACGCCCTG GCCCAATACC GGGAGTTGCG CAGCCGAGGC
TACGACCATT CCCGAATTGT CCGGGCAAAC GTCAATGGCG TCCACGTATG GCGGGTCCAG
GCCGGGGTCT TCCCTGCCTT GGAAGTCGCC CGCTCCCACC TCGCCCGCCT GGAACGGACC
ATCCCTTCGT GTTTTATTCT CGCGGATTGA
|
|---|
| Protein sequence | MTPNKATFMR IFHTACAVLG SLVLLWSLAG CMGSVEGPPH SASIPSKSTG TFRPYTINGQ
TYRPLRSANG YVEQGIASWY GSDFHGKPTA NGERYDMHAM TAAHRTLPMN TKLMVTNLRN
NKQTTVRIND RGPFVKNRIL DLSFAAAKRL GVVGPGTAPV RIKAVGSWPQ QVRGRFYIQT
GSYREKENAL AQYRELRSRG YDHSRIVRAN VNGVHVWRVQ AGVFPALEVA RSHLARLERT
IPSCFILAD
|
|---|
| |