| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2231 |
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| Symbol | |
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| ID | 8420088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2532495 |
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| End bp | 2535173 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038831 |
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| Product | outer membrane protein assembly complex, YaeT protein |
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| Protein accession | YP_003199093 |
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| Protein GI | 258406351 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGCA CTCTCCCTTT GATCTGTATT GCTCTTCTCG TCTGGGCCCT GATGGGAGCT
GTCCCCCCAT CAGTCGCTGC GGCCCAAGCA GAGGACACGG CCCTTGTCGT GCTCCCTTTC
GAGATCAATG CCGAGCAAAA TCTTGACTAT CTGGGCCAGG ACCTGCCGGA GATGCTGCGC
GGCAAACTCC GGGACAAGGG GTTTGCTGTC CGCTCCCAGG AAGACACTCT TCGGCTTTTG
CAGCAGGAAG AGGTCGAGTT TTTGAATCTG GAACGGGCCA GGGATCTGGC GTTGTTGGGC
AAGGCCCAAT ACGCGATCTA CGGCAGCCTG AGCCAGGTCG GCACGAATCT CAGTCTCGAC
GCCCGCTTGG TGGAGGCCAC CGGCCTGAAA CAGCCGACTC CGTTTTTCGT GGTCAAAGAG
GGCCTGATCA ACCTTATGCC AGCTGTAGAG GAACTGGCGG ACAAGGTTGC CGACCAGATC
TTGCGCAAGG AGAAAATCAG CGAGATCAAG GTGGAAGGCA ACGAAATCCT TGATGACGAT
GTGGTCCTGA TGCGCCTGCG CCTCCAGGAA GGGGACACGT ATGACCCCAA GGCGATCAAC
ACCGAGGTCA AACGGCTGTA CCAGCTCGGG TATTTCGATG ACGTCCGAGT CGAAGTCGAG
GAGACCCGGG AGGGCAAGGA GGTTGTCTTT CAGGTCCAAG AGAAACCGTT GATTCAGGCC
ATTGGCGTCA AAGGTGCCGA TGCCATCGAC AAGGACGATA TCCTGGAGGT CATGTCGACC
AAGACTGGGG CAGTTCTCAA TCCCAAGGTT ATCGCCGAGG ATCTGAAAAA AATCCGCGAA
GTCTACCGCA AGGAAGGGTA TTATCAGGCC GAGGTCGATT ATGAACTCGA GCAGACCGAT
CCCCGCAAGG CGCGTTTGAA CGTCCTCGTC GAAGAAGGGG ACAAATTGTA TATCGAGGAC
ATCCGTATCA AGGGCGCCAA AGTCCTGGAC CCCGGTGATC TCAAGGATGA ACTCGCGCTT
TCTGAACGGG GGCTGTTTTC CTGGCTCACA GGCCGTGGGG TACTTAAAGA GGAATTGCTG
GACCGGGATG CCGCCGCCCT GGAGGCCTAT TATTCCAACC GCGGGTTCAT GGACGCCAAA
GTCGGGCAGC CCGAGGTCGA GTACACGGAC GAGGGCATTG TGATCACCTT CCACGTCAAG
GAAGGGGACC GCTACAGCGT GGCCGGGGTG GATTTCAGCG GTGACCTGTT GACCGGAAAA
AAAGAGCTTG CGGCTCAGAC CCAGCTCGAT GATGCGGCCG AGGAAAAGGC CCCCTTTGAT
CGCTCAGTGC TGCGGGAGGA TATACAGAGC CTGACCGACT TTTACACCAA CTACGGCTAT
GCCTATGCCG AGGTTGATGT CCAGATGGAT AGGGACCGGG ACGAGGATAC GGTCCGCGTA
TCGTATAATT TGCGCAAAAA TCAGAAGGTT TATGTCCGCC GGGTGACCAT TGAGGGCAAC
ACCAAGACCC GCGACAATGT CATCCGCCGC GAGATGCGCC TGGCAGACGG CGACATGTTC
AGCGGGGCCG CACTGCGCCG GTCCAATGTC CGGCTGCAAA AACTCGACTA TTTCGAGAAG
GTCGATATCC AGACTGTTCC GACCTCTGAC CGCGAACGCA TGGACCTGGT GGTCCAGGTC
AAGGAAAAGT CCACAGGCAT GCTCAGCGCC GGTGCCGGGT ATTCCAGTGT CGACAGTGTC
TTTTTGAGCG GCCAGGTCAA GGAGCGCAAC CTGTTCGGCA AAGGGTACAC AGCAAGCCTG
CAGGGAACCT TCAGCGGCTC CCGGACCCGG TACGATCTCG ACTTCTGGAA TCCCCATCTC
TACGATTCCC CATTGGGGGC CGGAACCAAT GTCTACTATG TGACCCGCGA ATACGACGAT
TACGACAAGA ATTCCATCGG TGGCAAAGTC AAGTTCGGCT ATCCCTTGGG CGAATACACC
CGCTTGTTCT GGAATTACCG GCTGGAAAAG TATACCCTGG ACGAAATCGA CGAGGACGAG
GTCGACGAAG ACATCCTTGA GCGCGAAGGG GAAAATTGGG CCAGCGCCGT GTACGCTTCG
ATCAAGCGCG ACACCACGAA CCGCCGTTTG AATCCCTCCA AGGGCACGGT CAACACCCTT
TCCGTGGAAT ATGCCGGCGG CCTGATCGGC GGGGACGACG ATTTCGTGAA ATTCATCTAC
GACACGAGCT TTTACCAGCC GTTGCCGTTT GAACATATTT TCCACTGGCA CGCCCAAGTG
GGGCATGTCA TGGAGAACAG TGACGATGAG GTGCCGGATT TCGAACGCTT TTATCTCGGC
GGGATGGATG ACGTCCGGGG CTATCCCGGT CGGGAGATCT CACCCGAGGA CGATAGTGGT
GACGAAATCG GCGGCCACAC CTCGTTTTTC ACCAATTTCG AATATCTGTT CCCCTTGAGC
GACGAGCTCG GATTGATGGG GCTCGTCTTT TTTGACGCCG GGGACACCTG GGCCAAGGAC
GAGAGCTTTG ACGGCGAACT CTACAAGGCG GTTGGCGCCG GTGTTCGCTG GTACTCCCCG
CTTGGTCCCC TGCGCCTGGA ATACGGCTAC GGTCTTGATG AGATCGATGG GGAAACAAGT
GGCGGCCATC TCGAGTTCTC CGTTGGCCAG TTTTTCTAA
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| Protein sequence | MRCTLPLICI ALLVWALMGA VPPSVAAAQA EDTALVVLPF EINAEQNLDY LGQDLPEMLR
GKLRDKGFAV RSQEDTLRLL QQEEVEFLNL ERARDLALLG KAQYAIYGSL SQVGTNLSLD
ARLVEATGLK QPTPFFVVKE GLINLMPAVE ELADKVADQI LRKEKISEIK VEGNEILDDD
VVLMRLRLQE GDTYDPKAIN TEVKRLYQLG YFDDVRVEVE ETREGKEVVF QVQEKPLIQA
IGVKGADAID KDDILEVMST KTGAVLNPKV IAEDLKKIRE VYRKEGYYQA EVDYELEQTD
PRKARLNVLV EEGDKLYIED IRIKGAKVLD PGDLKDELAL SERGLFSWLT GRGVLKEELL
DRDAAALEAY YSNRGFMDAK VGQPEVEYTD EGIVITFHVK EGDRYSVAGV DFSGDLLTGK
KELAAQTQLD DAAEEKAPFD RSVLREDIQS LTDFYTNYGY AYAEVDVQMD RDRDEDTVRV
SYNLRKNQKV YVRRVTIEGN TKTRDNVIRR EMRLADGDMF SGAALRRSNV RLQKLDYFEK
VDIQTVPTSD RERMDLVVQV KEKSTGMLSA GAGYSSVDSV FLSGQVKERN LFGKGYTASL
QGTFSGSRTR YDLDFWNPHL YDSPLGAGTN VYYVTREYDD YDKNSIGGKV KFGYPLGEYT
RLFWNYRLEK YTLDEIDEDE VDEDILEREG ENWASAVYAS IKRDTTNRRL NPSKGTVNTL
SVEYAGGLIG GDDDFVKFIY DTSFYQPLPF EHIFHWHAQV GHVMENSDDE VPDFERFYLG
GMDDVRGYPG REISPEDDSG DEIGGHTSFF TNFEYLFPLS DELGLMGLVF FDAGDTWAKD
ESFDGELYKA VGAGVRWYSP LGPLRLEYGY GLDEIDGETS GGHLEFSVGQ FF
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