Gene Dret_2219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2219 
Symbol 
ID8420076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2521187 
End bp2522989 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content60% 
IMG OID645038819 
Productpenicillin-binding protein 2 
Protein accessionYP_003199081 
Protein GI258406339 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACG CCGAACTCTT TCAGCCATCG AAAAAAGGCC TCGTTCTTGT CCGGCTTTGT 
ATTCTGGGGC TGTTCTGCGT TTTTGCTCTG CGTTTGTGGT ATCTACAGAT CCACAAGGGG
GAGACGTTTG CCAGTAAAGC CCGGGAAAAC CGGCTCCGCG AGATTCCCGT CTATGCCCCC
CGGGGGCTGA TTCGGGACCG GCACGGGACC CTGGTCGCGG AAAACACCCC TGCCTACGCG
CTGGCCCTTA TCCGGGAGGA ATCCCCCGAC ATTGCCGCCT GCCTGCAGCA AGTCAGTCGC
TGGACCGGCC ACCCTCTTTC TGAACTCCGC TCCCGTTTTG AGCGCGGGCG GAAGCGGACC
CGCCCTTTTG AATCACAGGT GCTCATCCCC CATTTGGATT TCGAACTCGT GGCTCGCATT
GAGGCCCACG CCCCTGAATG GCCGGGACTG AAAGTCTTGA GCCGGCCACA GCGGTATTAT
CCCTATGGGC GTGATCTGGC TCATGTCCTG GGGTATGTCG CCCAGGCTTC AGAGGAAGAA
CTCCGCTCCG ATTCCATGCT CCGATTGGGC GATACGGTCG GTAAGCAGGG CATTGAAAAG
GTCTTGGAAC AGCGATTGCG CGGTGACAAA GGGCGGAAAC AGGTGGAGGT CGATGCTGTG
GGCCGCGGCC TCCAGGAACG GGTCTTGCGA CAGCCCAAGG CGGGTAACGA TGTCCGCCTG
AGCATTGATT TGTCCCTGCA ACGTCTGGCC ATGGATCTTC TGACCGACAA GGCCGGGGTG
ATCATTGTTC TCGAACCGGA AACAGGCCAG GTGCTGACGT TGGCCTCAAG CCCGTCTTAT
GACAGCAATC TTTTTGTCGA AGGGATCTCA CCGAAGGATT GGAAACGGCT TTTGCACCAC
CCCCGCAATC CGCTGCAGAA CAGGGCCATT CAGAGTGCCT ACCCTCCGGG GTCCGTGTTC
AAGCTGGTCA TGGCCGGGTG CGCGTTGCAT GAAATGGGCG TCGATCCAGA GCGGGAGGTG
TATTGCAACG GCGCCTACCG ACTGGGGAAC AGGTCGTTTC GATGTTGGAA GAAATGGGGG
CACGGGGATG TAGATCTGCA AAAGGCCCTG GTCCAATCCT GTGATGTGTA TTTTTATAAG
CTGGGTCAGG AACTCGGCGT GGATACGATC AGTCCCTACG CCAAGGCCTG GGGCCTTGGC
AGTAAAACCG GGATCGGGCT GCCCCACGAA CGCAATGGCC TCATTCCGAG CCGGGCCTGG
AAACGGCATC AGCTCGGGGC CGGCTGGCAG GGTGGAGAAA CCTTGAATAT GTCGATCGGC
CAAGGGTTTA CACTGACCAC GCCGCTGCAG ATCGCTCGGG TGGTCGGGGC CCTGGTCAAC
AAGGGGCAGT TGGTGAAGCC GACACTGCTG CAGGATGCGG CTGTGGAGAT CGAGGGCGAA
GTTCCGCTGG ATCCTCCAGA ACGGCAGCGG ATCGTCGAGT ACATGGTCGA TACCGTTGAG
TCACGCCGGG GTACGGCTCG TGTCCTGCGC ACCGAGGATG TGGTCATCGG GGGCAAAACC
GGCACGGCCC AGGTCGTGAA GCTCAGAGAC GATGAGGAGG AAGAGGAGGA GACCCCGTAT
AAATACCGCG ACCACGCCTG GATGGCGAGT TTCGGTCGCC GAGGTGAGGA CCAATACGTG
GTGGTAACCT TTATTGAGCA CGGCGGACAT GGGGGGGCGG CGGCTGGTCC GCCGACCAAG
GCCATCTATG AAGCACTTTT TCCCCAGTTG GGAAAAGGAG ACGAGACCGA TGACGCCGGT
TGA
 
Protein sequence
MLDAELFQPS KKGLVLVRLC ILGLFCVFAL RLWYLQIHKG ETFASKAREN RLREIPVYAP 
RGLIRDRHGT LVAENTPAYA LALIREESPD IAACLQQVSR WTGHPLSELR SRFERGRKRT
RPFESQVLIP HLDFELVARI EAHAPEWPGL KVLSRPQRYY PYGRDLAHVL GYVAQASEEE
LRSDSMLRLG DTVGKQGIEK VLEQRLRGDK GRKQVEVDAV GRGLQERVLR QPKAGNDVRL
SIDLSLQRLA MDLLTDKAGV IIVLEPETGQ VLTLASSPSY DSNLFVEGIS PKDWKRLLHH
PRNPLQNRAI QSAYPPGSVF KLVMAGCALH EMGVDPEREV YCNGAYRLGN RSFRCWKKWG
HGDVDLQKAL VQSCDVYFYK LGQELGVDTI SPYAKAWGLG SKTGIGLPHE RNGLIPSRAW
KRHQLGAGWQ GGETLNMSIG QGFTLTTPLQ IARVVGALVN KGQLVKPTLL QDAAVEIEGE
VPLDPPERQR IVEYMVDTVE SRRGTARVLR TEDVVIGGKT GTAQVVKLRD DEEEEEETPY
KYRDHAWMAS FGRRGEDQYV VVTFIEHGGH GGAAAGPPTK AIYEALFPQL GKGDETDDAG