Gene Dret_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2216 
Symbol 
ID8420073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2518488 
End bp2519066 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content56% 
IMG OID645038816 
ProductATP synthase F0, B subunit 
Protein accessionYP_003199078 
Protein GI258406336 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.207765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAAGAT TACGGAGCAT CGGGGTCATC GCGACGGCGC TGGTCTTCAT GGCCGTTGCC 
GCCTGGGCCT CAGAACAGGG GGGCGGAGAA GCCGCGCACG GCGGATCGTG GATGAACCTT
TTCTGGCGGA CAGTGAATTT TGTTATTTTC GTGGCCATTA TTTATAAATT GGCCGGAAAG
CGCATCCGGG AGTTTTTTAC CGGACGGCGC CACCGTATCG CGACGGAACT CAAGGACCTT
GAGACCCGCA AAGCGGATAC GGAAAAACGC TTGGCCGAGG TCGAGCAAAG CATTGCTGAC
CTGGACAAGA AACGTGAAGA CATCTTGGCG GAGTACAAGC AACAGGGCGA GGCTCTCAAG
GAATCCATCG TGGCCAAAGC CCACGAGCGG GCTGAGCAGA TCCAGGCCCA GGCCGAGAAG
ACGGCCCAGC AAGAGCTTCG GCAGGCGGTC AAGGACGTGC GGGCCGAGAT CGCCGAGGCT
GTCGCCTCTG CCGCGGAGAA GTCGATTGCG GATAAATTGA ATAAGGAAGA TCATAAAAAA
CTTGTTCAAG ATTATCTAAC AAAGGTGGTG CTCAATTGA
 
Protein sequence
MRRLRSIGVI ATALVFMAVA AWASEQGGGE AAHGGSWMNL FWRTVNFVIF VAIIYKLAGK 
RIREFFTGRR HRIATELKDL ETRKADTEKR LAEVEQSIAD LDKKREDILA EYKQQGEALK
ESIVAKAHER AEQIQAQAEK TAQQELRQAV KDVRAEIAEA VASAAEKSIA DKLNKEDHKK
LVQDYLTKVV LN