| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2214 |
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| Symbol | |
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| ID | 8420071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2516420 |
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| End bp | 2517934 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645038814 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_003199076 |
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| Protein GI | 258406334 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.188551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCA AAGCAGAGGA AATCAGCAAG GTCATTCAGG ACCAGATCCA GAATTATGAA
GCTCGGATGG AAACCAGCGA AACCGGTACG GTCATCTATG TTGGTGACGG TATCGCCCGG
GTCCACGGCG TGCAAAACGC CATGGCCATG GAATTGCTGG AGTTCCCCGG CGGCGTAAAA
GGGATGGTCC TGAACCTGGA CGAAGACAAT GTCGGCGTGG CCTTGCTCGG TGAGGACTCC
CACATCAAAG AAGGGGACGA GGTCAAACGT ACGGGCGAGA TTTTTTCCGT GCCGGTTGGC
GAAGCGGTCA AGGGTCGCGT TATTTCACCC CTGGGTGAGC CGCTCGACGG CCTGGGGCCC
ATTGACGACA CCGAGAGCCG TCCGGTGGAA ATCAAAGCTC CGGGCATTGT TCAGCGTAAA
TCGGTCCATG AACCCATGTA CACTGGGCTG AAGGCCATTG ACGCCATGAC GCCCATCGGC
CGTGGTCAGC GCGAATTGAT CATCGGCGAC CGTCAGGTTG GAAAGACCGC GATCTGTCTG
GACTCGATTC TGGCTCAGAA AGATTCCGAC GTGCATTGCT TCTACGTGGC CATCGGGCAG
AAAAAATCCA CTGTGGCTTT GGTGGCCGAC GCCCTGCGCC AGCACGGCGC CATGGAATAC
ACGACCATCA TCTCGGCCAC CGCGTCTGAA GCGGCCTCGC TGCAATTTAT TGCCGCCTAC
GCCGGATGCA CCATGGGCGA ACATTACCGG GACAACGGCC AGCACGCGCT TATCTGCTAC
GATGACTTGT CCAAGCAGGC TGTGGCTTAT CGCCAGATGT CACTGCTGCT GCGGCGCCCC
CCCGGACGTG AAGCCTTCCC CGGCGACGTC TTCTACCTCC ACTCCCGTCT GCTCGAGCGC
GCGGCCAAGC TGAGTGATGA GGAAGGGGCC GGCTCCCTGA CCGCCCTGCC GATCATCGAA
ACCCAGGCAG GCGACGTGTC AGCCTACATC CCGACAAACG TTATTTCCAT TACCGACGGC
CAGGTCTATC TGGAACCGAA CTTGTTCAAT GCTGGGGTCC GTCCGGCGAT TAACGTCGGT
CTCTCGGTCT CCCGTGTCGG CGGTGCTGCT CAGATCAAGG CCATGAAACA GGTTGCTGGT
ACATTGCGCC TTGACCTGGC CCAATATCGC GAATTGGCCG CGTTCGCCCA GTTCGGTTCC
GACCTGGACA AGGCGACACA GCAAAAACTC GAGCGCGGTG CGCGCATGGT CGAATTGCTC
AAGCAGCCCC AATACAAGCC CATGAAGGCC GAGGAACAGG TGGCCGTGCT CTTTGCCGGC
ACCCGCGGCT ATATGGATGA TGTTCCTACT GATGCCGTGC GGAAGTTCGA GGACGAATAT
CTCGAGTTCA TGTACAATTC CAAGCAGGAC GTTTTGCAGG CCATCAAAGA GCAGGCAAAA
TTGGACGAGG CCCTGGAAGA AAAACTCAAG GCGGCTGTGG AGGAGTTCAA AAAGGGATTC
CGCGCTGAAG GCTAG
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| Protein sequence | MQIKAEEISK VIQDQIQNYE ARMETSETGT VIYVGDGIAR VHGVQNAMAM ELLEFPGGVK
GMVLNLDEDN VGVALLGEDS HIKEGDEVKR TGEIFSVPVG EAVKGRVISP LGEPLDGLGP
IDDTESRPVE IKAPGIVQRK SVHEPMYTGL KAIDAMTPIG RGQRELIIGD RQVGKTAICL
DSILAQKDSD VHCFYVAIGQ KKSTVALVAD ALRQHGAMEY TTIISATASE AASLQFIAAY
AGCTMGEHYR DNGQHALICY DDLSKQAVAY RQMSLLLRRP PGREAFPGDV FYLHSRLLER
AAKLSDEEGA GSLTALPIIE TQAGDVSAYI PTNVISITDG QVYLEPNLFN AGVRPAINVG
LSVSRVGGAA QIKAMKQVAG TLRLDLAQYR ELAAFAQFGS DLDKATQQKL ERGARMVELL
KQPQYKPMKA EEQVAVLFAG TRGYMDDVPT DAVRKFEDEY LEFMYNSKQD VLQAIKEQAK
LDEALEEKLK AAVEEFKKGF RAEG
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