Gene Dret_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2213 
Symbol 
ID8420070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2515539 
End bp2516408 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content55% 
IMG OID645038813 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_003199075 
Protein GI258406333 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.357273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCTT TGAAGGATGT CAAGAATAAG ATAGCTGGGG TGAAGAAGAC CAAGCAGATC 
ACCCGAGCCA TGAATATGGT CGCCTCGGCC AAGCTGCGCA GGGCCCAGGA CCGGATCGTT
CGTTTCCGGC CCTATGCCGA GAAATTTTAC GATATTCTCG GCGATCTCTC CGCACGCGCC
GATCACGATG CCCACCCGTT GCTGGAAGTC CGGGAGGAGA TCCAGAATGT AGGCATCGTC
TTGATCACTT CCGATAAAGG GTTGTGCGGC AGCTTCAATA TGAATCTGAT CCAACAGGCG
TTGAAGCTGG CTGAGGCAAA ACACAACGAA GGGAAGTCCG TGACTTTCTA CTGCGTGGGC
AAAAAGGGCC GCGATGCGGT TCGTAAACGG GGCTATACCC TGGCCACGGC CCATGTGGAT
GAAATGAACG TCTTTGATTT CTCGTTGGCC AACTCGATTG GCACGGAAGT CATCGACGCC
TATCTGGACG GCAGCCTGGA CGAGGTCCAT CTTGTCTATG GTGAGTTCGT TACCCTTATT
CGCCAGAACC CCAGACAATT GCAGATGCTG CCGATTGTGA CGGAAGGCGA AGCCGAGGAA
ACCGGCGCCG CCAGCGAATA CATCTACGAG CCCTCTGTCG AGGGACTATT GGCGGAGATC
CTGCCGCGCT TTATCAAGGT CCAGGTCTAT AGAGGATTGC TGGATACATC GGCCAGTGAG
CATGCCGCGC GCATGACTGC GATGGACAAC GCCACAAACA ATTGTGACGA TATGATCAGT
TCGCTGACTC TGGTCTACAA CAAGACCCGG CAGGCGGCCA TCACCACAGA ACTCATGGAT
ATCGTCGGCG GCGCTGAAGC GCTGCAATGA
 
Protein sequence
MPSLKDVKNK IAGVKKTKQI TRAMNMVASA KLRRAQDRIV RFRPYAEKFY DILGDLSARA 
DHDAHPLLEV REEIQNVGIV LITSDKGLCG SFNMNLIQQA LKLAEAKHNE GKSVTFYCVG
KKGRDAVRKR GYTLATAHVD EMNVFDFSLA NSIGTEVIDA YLDGSLDEVH LVYGEFVTLI
RQNPRQLQML PIVTEGEAEE TGAASEYIYE PSVEGLLAEI LPRFIKVQVY RGLLDTSASE
HAARMTAMDN ATNNCDDMIS SLTLVYNKTR QAAITTELMD IVGGAEALQ