Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2212 |
Symbol | |
ID | 8420069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2514112 |
End bp | 2515518 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038812 |
Product | ATP synthase F1, beta subunit |
Protein accession | YP_003199074 |
Protein GI | 258406332 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.721667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGA ACAAAGGCAA AATAGCTCGC GTTATGGGGG CTGTTGTCGA CGTGGACTTC ACCGACGGAC AGCTGCCTGA ACTCATGAGC GCGTTGGATA TTAACAACCC GAACAATCAG GACGCATCCG ACCTCGTGGT CGAGGTCGCC CAGCACCTTG GCGATAAAGT GGTTCGCTGC ATTGCCATGG ACGCGACGGA AGGCCTGGTT CGTGGGATGG AAGTCGTTGA TACCGGAAAG CCCATCTCGG TTCCTGTGGG CAAGCCCTCC CTGGGGCGGA TCATGAACGT TGTCGGGCGT CCCGTTGACG AAGCCGGCCC CATTGATGAC AGCATCACGA TGCCTATTCA CCGTGAGGCT CCGGAACTCG TCGATCAGAA TACGGCCGTC GAACTCCTGG AAACCGGTAT TAAGGTTGTC GATCTGCTGA TCCCCTTTCC CAAGGGCGGG AAAATGGGCC TCTTCGGAGG CGCCGGTGTC GGCAAGACGG TTATCCTTAT GGAGATGATC AACAATATCG CCAAGGAACA CGGCGGTAAA TCGGTCTTCG CCGGTGTCGG GGAGCGGACC CGTGAAGGCA ACGACCTCTA CGAAGAAATG AAGGAAGCCG GGGTTATCAA CAACGCCGCG CTGATTTACG GGCAGATGAA CGAACCTCCT GGAGCCCGTG CCCGGGTGGC GCTGACTGCG CTGACCTGTG CGGAGTATTT CCGTGACGAG GAAGGGGAAG ACGTCCTGCT CTTTATCGAC AATATCTTCC GCTTCACCCA GGCCGGGATG GAAGTTTCCG CCCTGCTTGG CCGGATGCCT TCCGCGGTCG GTTACCAGCC GACCCTGGGC ACCGACCTTG GTGAACTCCA AGAACGGATC ACCTCGACGC AAAAAGGCTC CATCACCTCG GTCCAGGCCG TGTATGTGCC TGCCGACGAC TTGACCGACC CCGCGCCGGC CACGACCTTT TCGCACTTGG ACGGAACCCT TGTTTTGTCC CGTCAGATCG CTGAACTGGG GATTTACCCC GCTGTGGACC CCTTGGACTC CACGTCGCGG ATTCTGGACC CCAACGTCCT GGGCACTGAG CACTATCAGG TCGCCCGCGG CGTGCAGCAG GTCCTGCAGA AGTACAAGGA TCTCCAGGAT ATCATTGCCA TTCTGGGTAT GGAAGAATTG TCCGATGAGG ACAAGTTGAC CGTCTCCCGG GCCCGTAAAA TCCAGCGCTT TCTCTCGCAG CCCTTCCACG TGGCCGAGGC CTTCACCGGC AAGCCTGGCA ACTATGTCCG TATCGAGGAT ACCATCAAGG GCTTTAAGTC CATCTTGGAC GGCGAACTTG ATGATATCCC GGAAGGCGCC TTTTACATGG CCGGTGATAT CAACGAAGTG CTTGAAAGAG CCAAACAATC CTCGTAA
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Protein sequence | MSVNKGKIAR VMGAVVDVDF TDGQLPELMS ALDINNPNNQ DASDLVVEVA QHLGDKVVRC IAMDATEGLV RGMEVVDTGK PISVPVGKPS LGRIMNVVGR PVDEAGPIDD SITMPIHREA PELVDQNTAV ELLETGIKVV DLLIPFPKGG KMGLFGGAGV GKTVILMEMI NNIAKEHGGK SVFAGVGERT REGNDLYEEM KEAGVINNAA LIYGQMNEPP GARARVALTA LTCAEYFRDE EGEDVLLFID NIFRFTQAGM EVSALLGRMP SAVGYQPTLG TDLGELQERI TSTQKGSITS VQAVYVPADD LTDPAPATTF SHLDGTLVLS RQIAELGIYP AVDPLDSTSR ILDPNVLGTE HYQVARGVQQ VLQKYKDLQD IIAILGMEEL SDEDKLTVSR ARKIQRFLSQ PFHVAEAFTG KPGNYVRIED TIKGFKSILD GELDDIPEGA FYMAGDINEV LERAKQSS
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