Gene Dret_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2212 
Symbol 
ID8420069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2514112 
End bp2515518 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content58% 
IMG OID645038812 
ProductATP synthase F1, beta subunit 
Protein accessionYP_003199074 
Protein GI258406332 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.721667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGA ACAAAGGCAA AATAGCTCGC GTTATGGGGG CTGTTGTCGA CGTGGACTTC 
ACCGACGGAC AGCTGCCTGA ACTCATGAGC GCGTTGGATA TTAACAACCC GAACAATCAG
GACGCATCCG ACCTCGTGGT CGAGGTCGCC CAGCACCTTG GCGATAAAGT GGTTCGCTGC
ATTGCCATGG ACGCGACGGA AGGCCTGGTT CGTGGGATGG AAGTCGTTGA TACCGGAAAG
CCCATCTCGG TTCCTGTGGG CAAGCCCTCC CTGGGGCGGA TCATGAACGT TGTCGGGCGT
CCCGTTGACG AAGCCGGCCC CATTGATGAC AGCATCACGA TGCCTATTCA CCGTGAGGCT
CCGGAACTCG TCGATCAGAA TACGGCCGTC GAACTCCTGG AAACCGGTAT TAAGGTTGTC
GATCTGCTGA TCCCCTTTCC CAAGGGCGGG AAAATGGGCC TCTTCGGAGG CGCCGGTGTC
GGCAAGACGG TTATCCTTAT GGAGATGATC AACAATATCG CCAAGGAACA CGGCGGTAAA
TCGGTCTTCG CCGGTGTCGG GGAGCGGACC CGTGAAGGCA ACGACCTCTA CGAAGAAATG
AAGGAAGCCG GGGTTATCAA CAACGCCGCG CTGATTTACG GGCAGATGAA CGAACCTCCT
GGAGCCCGTG CCCGGGTGGC GCTGACTGCG CTGACCTGTG CGGAGTATTT CCGTGACGAG
GAAGGGGAAG ACGTCCTGCT CTTTATCGAC AATATCTTCC GCTTCACCCA GGCCGGGATG
GAAGTTTCCG CCCTGCTTGG CCGGATGCCT TCCGCGGTCG GTTACCAGCC GACCCTGGGC
ACCGACCTTG GTGAACTCCA AGAACGGATC ACCTCGACGC AAAAAGGCTC CATCACCTCG
GTCCAGGCCG TGTATGTGCC TGCCGACGAC TTGACCGACC CCGCGCCGGC CACGACCTTT
TCGCACTTGG ACGGAACCCT TGTTTTGTCC CGTCAGATCG CTGAACTGGG GATTTACCCC
GCTGTGGACC CCTTGGACTC CACGTCGCGG ATTCTGGACC CCAACGTCCT GGGCACTGAG
CACTATCAGG TCGCCCGCGG CGTGCAGCAG GTCCTGCAGA AGTACAAGGA TCTCCAGGAT
ATCATTGCCA TTCTGGGTAT GGAAGAATTG TCCGATGAGG ACAAGTTGAC CGTCTCCCGG
GCCCGTAAAA TCCAGCGCTT TCTCTCGCAG CCCTTCCACG TGGCCGAGGC CTTCACCGGC
AAGCCTGGCA ACTATGTCCG TATCGAGGAT ACCATCAAGG GCTTTAAGTC CATCTTGGAC
GGCGAACTTG ATGATATCCC GGAAGGCGCC TTTTACATGG CCGGTGATAT CAACGAAGTG
CTTGAAAGAG CCAAACAATC CTCGTAA
 
Protein sequence
MSVNKGKIAR VMGAVVDVDF TDGQLPELMS ALDINNPNNQ DASDLVVEVA QHLGDKVVRC 
IAMDATEGLV RGMEVVDTGK PISVPVGKPS LGRIMNVVGR PVDEAGPIDD SITMPIHREA
PELVDQNTAV ELLETGIKVV DLLIPFPKGG KMGLFGGAGV GKTVILMEMI NNIAKEHGGK
SVFAGVGERT REGNDLYEEM KEAGVINNAA LIYGQMNEPP GARARVALTA LTCAEYFRDE
EGEDVLLFID NIFRFTQAGM EVSALLGRMP SAVGYQPTLG TDLGELQERI TSTQKGSITS
VQAVYVPADD LTDPAPATTF SHLDGTLVLS RQIAELGIYP AVDPLDSTSR ILDPNVLGTE
HYQVARGVQQ VLQKYKDLQD IIAILGMEEL SDEDKLTVSR ARKIQRFLSQ PFHVAEAFTG
KPGNYVRIED TIKGFKSILD GELDDIPEGA FYMAGDINEV LERAKQSS