| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2181 |
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| Symbol | rpmA |
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| ID | 8420037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2485239 |
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| End bp | 2485505 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038780 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_003199043 |
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| Protein GI | 258406301 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.128983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.935252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACATA AAAAAGCAGG CGGGAGTTCG CGCAACGGTC GCGATAGTAT TGGCCAAAGG
CGTGGCGTTA AACGCTTCGG CGGGCAGCAG GTCCAAGCCG GCAACATTCT CGTGCGCCAA
CTGGGCACCA AGATCCATCC CGGCCGCAAT GTTGGCCTGG GCAAGGACTA CACCCTGTTC
GCCAAGTCTG ACGGCGTGGT GACCTTTGAA AAGTACACCC GGAAACGCAA GACGCGGACC
CGGGTACACG TCGAGCCCGC CTCCTAG
|
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| Protein sequence | MAHKKAGGSS RNGRDSIGQR RGVKRFGGQQ VQAGNILVRQ LGTKIHPGRN VGLGKDYTLF
AKSDGVVTFE KYTRKRKTRT RVHVEPAS
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