| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2161 |
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| Symbol | |
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| ID | 8420012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2457518 |
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| End bp | 2458492 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038755 |
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| Product | protein of unknown function DUF534 |
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| Protein accession | YP_003199023 |
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| Protein GI | 258406281 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.321904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACA AGACGAATCT GCTTATTGCC GCCGTTGTGA CCGTTCTTGT TTTCTTCGGT
GCATCCGTCC AGGCCAAGAC GTACGAAATC TCTGTCAGCC AGTTTGTGGA GCACCCCGCC
CTCGACGCTG TCCTTCAGGG TTTCCAGGAC GCGGTTGCTG AGGCCGGAAT CGAGGTCGAC
TACAACGTCC ACAACGCGCA GGCCAACACG GCCATCACTG GGCAAATCGC CCAGCAGATC
GCCGGGGAGC GCCCGGATCT GGTCCTGGCC ATTGCCACCC CGACAGCTCA GGCGTGTGCC
CAGGTCACCA AAAAAGCGCC CCATATGGCC AAAACCCCCC TCCTTTTTTC TGCGGTCACC
GACCCCGTCG GGTCCGGCCT GGTCGACAAC CTGGAACGCC CCGGGGGCAA CATCACCGGC
ACCTCCGACC TGACGCCCAT CGGCAAGCAC CTGGATCTTA TTCGGACCAT CCAGCCTGAG
CTCAAGACCG TTGGTGTGAT CTATAATGCC GGCGAGGCCA ACTCCAAGAC ATTGGTCGGG
CTGGTCCGCG ACGAAGGGCA AAAACGCGGC ATCGCTGTCG AAGAAGCGAC CGCCGCACGT
TCGAGCGAGG TCTATCAGGC TGCCAAGAGC CTGGTCGGTG TCGCCGATGC CGTTTATGTG
CCCACCGACA ACACCATCGT TTCCGCTTTC GAGTCCGTGA CCAAAGTCTG CCTGGACAAT
GATCTTCCTC TCTACGCCGC TGATGTCGAC TCTGTGCCTC GCGGCGCCAT CGCCGCTCTT
GGCTTTGACT ACTACAAACA CGGACGCCAG ACGGGCAACA TGGCCGTTCG CATCCTTCGG
GGCGCCGATC CGGGCCAGAC CCCGGTAGAG ATGCAAAAAG ATTTGGAACT CCACCTCAAT
CTCGAATCCG CTCAGGCTAT CGGGGTTGAA ATCCCCCAAA AGCTCAAGGA CCAGGCCGCC
AAGATCTACG AATAG
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| Protein sequence | MTHKTNLLIA AVVTVLVFFG ASVQAKTYEI SVSQFVEHPA LDAVLQGFQD AVAEAGIEVD
YNVHNAQANT AITGQIAQQI AGERPDLVLA IATPTAQACA QVTKKAPHMA KTPLLFSAVT
DPVGSGLVDN LERPGGNITG TSDLTPIGKH LDLIRTIQPE LKTVGVIYNA GEANSKTLVG
LVRDEGQKRG IAVEEATAAR SSEVYQAAKS LVGVADAVYV PTDNTIVSAF ESVTKVCLDN
DLPLYAADVD SVPRGAIAAL GFDYYKHGRQ TGNMAVRILR GADPGQTPVE MQKDLELHLN
LESAQAIGVE IPQKLKDQAA KIYE
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